Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDX1P47902 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 SNORD51.1-201ENST00000365405 77 ntBASIC4.91□□□□□ -1.62
CDX1P47902 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 MTND4P24-201ENST00000424002 397 ntBASIC4.91□□□□□ -1.62
CDX1P47902 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 AC112492.2-201ENST00000432774 1030 ntBASIC4.91□□□□□ -1.62
CDX1P47902 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.91□□□□□ -1.62
CDX1P47902 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 SNX18P26-201ENST00000458433 740 ntBASIC4.91□□□□□ -1.62
CDX1P47902 RN7SL221P-201ENST00000466190 281 ntBASIC4.91□□□□□ -1.62
CDX1P47902 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 OR4D12P-201ENST00000509361 911 ntBASIC4.91□□□□□ -1.62
CDX1P47902 MAST4-IT1-201ENST00000514241 658 ntBASIC4.91□□□□□ -1.62
CDX1P47902 RNU6-513P-201ENST00000516104 104 ntBASIC4.91□□□□□ -1.62
CDX1P47902 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.91□□□□□ -1.62
CDX1P47902 TOMM20P1-201ENST00000534518 427 ntBASIC4.91□□□□□ -1.62
CDX1P47902 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.91□□□□□ -1.62
CDX1P47902 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.91□□□□□ -1.62
CDX1P47902 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 MTCO3P22-201ENST00000603219 784 ntBASIC4.91□□□□□ -1.62
CDX1P47902 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 FAM72A-208ENST00000607379 1139 ntBASIC4.91□□□□□ -1.62
CDX1P47902 AC024255.1-201ENST00000614376 102 ntBASIC4.91□□□□□ -1.62
CDX1P47902 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 TCP1P3-201ENST00000414406 1498 ntBASIC4.91□□□□□ -1.62
CDX1P47902 NXF4-202ENST00000416098 1465 ntBASIC4.91□□□□□ -1.62
CDX1P47902 AL121950.1-201ENST00000624993 2077 ntBASIC4.91□□□□□ -1.62
CDX1P47902 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDX1P47902 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 AC003973.3-201ENST00000624863 2822 ntBASIC4.91□□□□□ -1.62
CDX1P47902 MT-RNR2-201ENST00000387347 1559 ntBASIC4.91□□□□□ -1.62
CDX1P47902 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.91□□□□□ -1.62
CDX1P47902 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDX1P47902 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.9□□□□□ -1.62
CDX1P47902 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDX1P47902 SPATA2P1-201ENST00000431223 2055 ntBASIC4.9□□□□□ -1.62
CDX1P47902 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDX1P47902 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDX1P47902 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
CDX1P47902 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDX1P47902 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.9□□□□□ -1.62
CDX1P47902 AC096921.2-201ENST00000561507 1916 ntBASIC4.9□□□□□ -1.62
CDX1P47902 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
CDX1P47902 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDX1P47902 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CDX1P47902 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDX1P47902 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.9□□□□□ -1.63
CDX1P47902 RNU6-31P-201ENST00000384388 108 ntBASIC4.9□□□□□ -1.63
CDX1P47902 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDX1P47902 AL034374.1-201ENST00000406329 351 ntBASIC4.9□□□□□ -1.63
CDX1P47902 Z86062.1-201ENST00000406773 777 ntBASIC4.9□□□□□ -1.63
CDX1P47902 RN7SKP144-201ENST00000411108 279 ntBASIC4.9□□□□□ -1.63
CDX1P47902 USP9YP19-201ENST00000412165 485 ntBASIC4.9□□□□□ -1.63
CDX1P47902 AL035422.1-201ENST00000414193 397 ntBASIC4.9□□□□□ -1.63
CDX1P47902 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.9□□□□□ -1.63
CDX1P47902 OR6K4P-201ENST00000423179 955 ntBASIC4.9□□□□□ -1.63
CDX1P47902 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.9□□□□□ -1.63
CDX1P47902 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.9□□□□□ -1.63
CDX1P47902 AC022022.1-201ENST00000430304 178 ntBASIC4.9□□□□□ -1.63
CDX1P47902 NDUFA5P10-201ENST00000432147 357 ntBASIC4.9□□□□□ -1.63
CDX1P47902 ZNF965P-201ENST00000432501 817 ntBASIC4.9□□□□□ -1.63
CDX1P47902 AC138761.5-201ENST00000433967 325 ntBASIC4.9□□□□□ -1.63
CDX1P47902 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.9□□□□□ -1.63
CDX1P47902 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.9□□□□□ -1.63
CDX1P47902 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.9□□□□□ -1.63
CDX1P47902 MTCYBP12-201ENST00000440559 1134 ntBASIC4.9□□□□□ -1.63
CDX1P47902 XKRY2-201ENST00000442362 1093 ntBASIC4.9□□□□□ -1.63
CDX1P47902 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.9□□□□□ -1.63
CDX1P47902 RPS10P18-201ENST00000442662 495 ntBASIC4.9□□□□□ -1.63
CDX1P47902 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.9□□□□□ -1.63
CDX1P47902 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.9□□□□□ -1.63
CDX1P47902 MORF4-201ENST00000447135 971 ntBASIC4.9□□□□□ -1.63
CDX1P47902 AL157827.1-201ENST00000447622 132 ntBASIC4.9□□□□□ -1.63
CDX1P47902 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.9□□□□□ -1.63
CDX1P47902 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.9□□□□□ -1.63
CDX1P47902 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.9□□□□□ -1.63
CDX1P47902 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms