Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AP001029.2-203ENST00000589795 4910 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 RAD1P1-201ENST00000231383 813 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NKX2-1P43699 RNA5SP211-201ENST00000365516 117 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 SNORA7A-201ENST00000384765 139 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 SNORD94-201ENST00000386037 137 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 MT-TP-201ENST00000387461 68 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 RN7SKP144-201ENST00000411108 279 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 GTF3AP1-201ENST00000416942 1004 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 NMD3P2-201ENST00000421815 761 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 BX119321.1-201ENST00000428912 797 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AL353898.1-201ENST00000444055 238 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 WDR82P2-201ENST00000444540 928 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AL034369.1-201ENST00000453808 477 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AL133351.3-201ENST00000454998 193 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC104164.1-201ENST00000460282 590 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 RN7SL790P-201ENST00000474043 298 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC015908.1-201ENST00000478739 476 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 RN7SL502P-201ENST00000481857 290 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC083795.1-201ENST00000491760 320 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 GM2AP2-201ENST00000491764 562 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 RNA5SP96-201ENST00000516041 107 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC027026.1-201ENST00000532323 742 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC021483.2-201ENST00000567415 758 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC027796.1-201ENST00000575593 512 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AL158211.2-201ENST00000607282 395 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 MIR6849-201ENST00000618543 69 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AL445670.1-201ENST00000618889 801 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC068213.1-201ENST00000625124 226 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 CLUHP10-201ENST00000631979 980 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.81□□□□□ -1.64
NKX2-1P43699 AC068870.3-201ENST00000625077 2536 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 ABCC13-202ENST00000463099 3842 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 AP001284.1-201ENST00000528393 2118 ntBASIC4.81□□□□□ -1.64
NKX2-1P43699 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NKX2-1P43699 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NKX2-1P43699 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-1P43699 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
NKX2-1P43699 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-1P43699 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-1P43699 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-1P43699 AC125336.1-201ENST00000508893 2827 ntBASIC4.8□□□□□ -1.64
NKX2-1P43699 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX2-1P43699 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-1P43699 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-1P43699 RN7SKP145-201ENST00000363291 303 ntBASIC4.8□□□□□ -1.64
NKX2-1P43699 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX2-1P43699 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX2-1P43699 SNORA70.6-201ENST00000383934 134 ntBASIC4.8□□□□□ -1.64
NKX2-1P43699 RNU6-31P-201ENST00000384388 108 ntBASIC4.8□□□□□ -1.64
NKX2-1P43699 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NKX2-1P43699 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-1P43699 AL391422.1-201ENST00000402155 436 ntBASIC4.8□□□□□ -1.64
NKX2-1P43699 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-1P43699 AC006509.1-201ENST00000420788 634 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms