Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC113412.1-201ENST00000425840 504 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.65□□□□□ -1.5
FDFT1P37268 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.65□□□□□ -1.5
FDFT1P37268 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
FDFT1P37268 RN7SL168P-201ENST00000463821 279 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 AC011476.1-201ENST00000466725 307 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 RN7SL583P-201ENST00000475692 287 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.65□□□□□ -1.5
FDFT1P37268 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.65□□□□□ -1.5
FDFT1P37268 AP001496.3-201ENST00000580230 913 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 MIR4271-201ENST00000582451 67 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
FDFT1P37268 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.65□□□□□ -1.5
FDFT1P37268 AC067773.1-201ENST00000603284 1094 ntBASIC5.65□□□□□ -1.5
FDFT1P37268 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.65□□□□□ -1.5
FDFT1P37268 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.65□□□□□ -1.5
FDFT1P37268 OR9K1P-202ENST00000641111 3217 ntBASIC5.65□□□□□ -1.51
FDFT1P37268 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FDFT1P37268 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.51
FDFT1P37268 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
FDFT1P37268 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
FDFT1P37268 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.65□□□□□ -1.51
FDFT1P37268 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FDFT1P37268 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.65□□□□□ -1.51
FDFT1P37268 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
FDFT1P37268 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
FDFT1P37268 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
FDFT1P37268 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 MIR551A-201ENST00000385042 96 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 HMGB1P20-201ENST00000402555 677 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 RPSAP35-201ENST00000413753 818 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 RPS10P18-201ENST00000442662 495 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 RNU7-157P-201ENST00000459600 66 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.64□□□□□ -1.51
FDFT1P37268 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 AC112184.1-201ENST00000505179 312 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 RNA5SP230-201ENST00000517039 122 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 TOMM20P1-201ENST00000534518 427 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.64□□□□□ -1.51
FDFT1P37268 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.64□□□□□ -1.51
FDFT1P37268 AL356608.1-201ENST00000610034 820 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.64□□□□□ -1.51
FDFT1P37268 AC138965.3-201ENST00000623875 498 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.64□□□□□ -1.51
FDFT1P37268 AC129915.3-201ENST00000634128 948 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.64□□□□□ -1.51
FDFT1P37268 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.64□□□□□ -1.51
FDFT1P37268 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 AC010266.2-201ENST00000564741 3255 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.64□□□□□ -1.51
FDFT1P37268 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 AC106872.5-201ENST00000508856 1416 ntBASIC5.64□□□□□ -1.51
FDFT1P37268 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
FDFT1P37268 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
FDFT1P37268 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
FDFT1P37268 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
FDFT1P37268 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FDFT1P37268 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
FDFT1P37268 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.63□□□□□ -1.51
FDFT1P37268 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
FDFT1P37268 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FDFT1P37268 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
FDFT1P37268 OR7E25P-201ENST00000344844 931 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 RNA5SP394-201ENST00000364216 119 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.63□□□□□ -1.51
FDFT1P37268 PPIAP9-201ENST00000403866 498 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 GAPDHP42-201ENST00000406848 981 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 AC005297.1-201ENST00000444765 862 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 LRRC37A14P-201ENST00000452297 462 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 HLA-DPA3-207ENST00000454398 229 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 TAAR4P-201ENST00000454843 1039 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.63□□□□□ -1.51
FDFT1P37268 AC012123.2-201ENST00000485809 248 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 RPL37P23-201ENST00000492641 294 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 RN7SL649P-201ENST00000496974 275 ntBASIC5.63□□□□□ -1.51
FDFT1P37268 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.63□□□□□ -1.51
FDFT1P37268 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.63□□□□□ -1.51
FDFT1P37268 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.63□□□□□ -1.51
FDFT1P37268 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.63□□□□□ -1.51
FDFT1P37268 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.63□□□□□ -1.51
FDFT1P37268 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms