Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC13P31276 MRPL53P1-201ENST00000414323 319 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 USP24P1-201ENST00000433802 779 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AC073410.1-201ENST00000435125 589 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 RPS3AP38-201ENST00000435889 763 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AC012075.1-201ENST00000436549 580 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC13P31276 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC13P31276 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 OR6C72P-201ENST00000451403 892 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AC002553.2-201ENST00000453217 340 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 HSPE1P22-201ENST00000456856 327 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AC093166.4-201ENST00000457867 318 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AL157777.1-201ENST00000468100 304 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 RN7SL184P-201ENST00000488308 297 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC13P31276 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 RNA5SP34-201ENST00000516887 130 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC13P31276 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC13P31276 AC011270.1-201ENST00000558606 583 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 AC084759.1-201ENST00000561168 290 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC13P31276 TXNP4-201ENST00000575018 310 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 MIR4505-201ENST00000582238 73 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AC079395.2-201ENST00000610982 737 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 AL359513.1-201ENST00000614364 557 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
HOXC13P31276 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 AC022164.1-201ENST00000568767 2673 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC13P31276 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HOXC13P31276 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC13P31276 AC027279.1-201ENST00000568885 4284 ntBASIC6.08□□□□□ -1.44
HOXC13P31276 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC13P31276 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 AL161756.3-201ENST00000641216 2071 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HOXC13P31276 SPTLC1P2-201ENST00000407089 121 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 SDHDP6-201ENST00000414693 480 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC13P31276 AL163193.1-201ENST00000444895 788 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 AC138866.2-201ENST00000508650 584 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC13P31276 RPS27AP18-201ENST00000515536 459 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 SNORA70.20-201ENST00000516848 126 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 AC090424.1-201ENST00000535243 736 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 AC007346.2-201ENST00000564816 892 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 AP000919.1-201ENST00000582850 985 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 AL135786.2-201ENST00000608422 615 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.07□□□□□ -1.44
HOXC13P31276 AL139099.4-201ENST00000614802 114 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 AC118658.2-201ENST00000618697 459 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 VPS35P1-201ENST00000563400 1518 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 SAMMSON-213ENST00000641336 1521 ntBASIC6.07□□□□□ -1.44
HOXC13P31276 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.07□□□□□ -1.44
HOXC13P31276 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC13P31276 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
HOXC13P31276 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.06□□□□□ -1.44
HOXC13P31276 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC13P31276 MT-RNR1-201ENST00000389680 954 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms