Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL8A2P25067 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL8A2P25067 RNU1-77P-201ENST00000390868 162 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.69□□□□□ -1.66
COL8A2P25067 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 RPL7L1P9-201ENST00000431298 745 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 OR6D1P-201ENST00000436165 939 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 AL596266.1-201ENST00000448132 400 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 RPS4XP1-201ENST00000482189 787 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 EIF1P7-201ENST00000487533 337 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 ST13P12-201ENST00000508958 1094 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 IGLV2-28-201ENST00000520681 304 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.69□□□□□ -1.66
COL8A2P25067 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.69□□□□□ -1.66
COL8A2P25067 AC137627.1-201ENST00000545761 289 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.69□□□□□ -1.66
COL8A2P25067 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 AC013244.1-201ENST00000604279 193 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 SUMO2P15-201ENST00000604285 278 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 NANOGP3-201ENST00000605855 286 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AL118522.2-201ENST00000616045 615 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AC021766.1-201ENST00000624404 741 ntBASIC4.69□□□□□ -1.66
COL8A2P25067 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
COL8A2P25067 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.69□□□□□ -1.66
COL8A2P25067 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL8A2P25067 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.68□□□□□ -1.66
COL8A2P25067 CASC19-260ENST00000641828 2001 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL8A2P25067 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.68□□□□□ -1.66
COL8A2P25067 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.68□□□□□ -1.66
COL8A2P25067 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.68□□□□□ -1.66
COL8A2P25067 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 RNA5SP326-201ENST00000363209 110 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC005042.1-201ENST00000393397 800 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 RPL11P3-201ENST00000395256 523 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.68□□□□□ -1.66
COL8A2P25067 BMS1P13-201ENST00000417301 885 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 CYCSP12-201ENST00000437729 300 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 AL163193.1-201ENST00000444895 788 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.68□□□□□ -1.66
COL8A2P25067 RPL7P45-201ENST00000455851 743 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 AC011225.1-201ENST00000457751 369 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.68□□□□□ -1.66
COL8A2P25067 RN7SL583P-201ENST00000475692 287 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC078878.1-201ENST00000539832 958 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC016180.1-201ENST00000567945 403 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC000068.2-201ENST00000608816 460 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.68□□□□□ -1.66
COL8A2P25067 AC136428.4-201ENST00000634254 1155 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL8A2P25067 CASC19-264ENST00000641912 1184 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.68□□□□□ -1.66
COL8A2P25067 MT-RNR2-201ENST00000387347 1559 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 AC144833.1-201ENST00000567953 4089 ntBASIC4.68□□□□□ -1.66
COL8A2P25067 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL8A2P25067 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL8A2P25067 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
COL8A2P25067 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL8A2P25067 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.67□□□□□ -1.66
COL8A2P25067 RNU1-136P-201ENST00000384181 164 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 RNU6-171P-201ENST00000384354 107 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 MIR1286-201ENST00000408112 78 ntBASIC4.67□□□□□ -1.66
COL8A2P25067 RNGTTP1-201ENST00000420965 728 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms