Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH3P22223 AL603750.1-201ENST00000624216 1717 ntBASIC5.69□□□□□ -1.5
CDH3P22223 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH3P22223 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH3P22223 RNU1-150P-201ENST00000362491 162 ntBASIC5.69□□□□□ -1.5
CDH3P22223 RNA5SP211-201ENST00000365516 117 ntBASIC5.69□□□□□ -1.5
CDH3P22223 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 RPS3AP2-201ENST00000407190 754 ntBASIC5.69□□□□□ -1.5
CDH3P22223 SNORA79B-201ENST00000410557 148 ntBASIC5.69□□□□□ -1.5
CDH3P22223 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH3P22223 RPS4XP5-201ENST00000419038 768 ntBASIC5.69□□□□□ -1.5
CDH3P22223 HMGB1P32-201ENST00000425971 565 ntBASIC5.69□□□□□ -1.5
CDH3P22223 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 AL731534.1-201ENST00000434711 269 ntBASIC5.69□□□□□ -1.5
CDH3P22223 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH3P22223 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH3P22223 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH3P22223 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 IGLVIV-64-201ENST00000518581 301 ntBASIC5.69□□□□□ -1.5
CDH3P22223 AC138832.1-201ENST00000522871 556 ntBASIC5.69□□□□□ -1.5
CDH3P22223 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH3P22223 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH3P22223 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH3P22223 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH3P22223 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 AC027243.2-201ENST00000602530 724 ntBASIC5.69□□□□□ -1.5
CDH3P22223 AL133406.3-201ENST00000606817 541 ntBASIC5.69□□□□□ -1.5
CDH3P22223 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.69□□□□□ -1.5
CDH3P22223 AC073575.2-201ENST00000614212 627 ntBASIC5.69□□□□□ -1.5
CDH3P22223 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 AC074140.1-201ENST00000621617 208 ntBASIC5.69□□□□□ -1.5
CDH3P22223 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AC114876.1-201ENST00000490962 1366 ntBASIC5.68□□□□□ -1.5
CDH3P22223 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 AC114774.1-201ENST00000507410 1770 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AC106872.5-201ENST00000508856 1416 ntBASIC5.68□□□□□ -1.5
CDH3P22223 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH3P22223 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH3P22223 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH3P22223 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH3P22223 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH3P22223 AL031985.1-201ENST00000392713 418 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AC015977.1-201ENST00000418887 292 ntBASIC5.68□□□□□ -1.5
CDH3P22223 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH3P22223 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH3P22223 AC097523.2-201ENST00000435551 652 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AL512637.1-201ENST00000439523 1231 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH3P22223 ARAFP2-201ENST00000440565 559 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AL663074.2-201ENST00000440621 479 ntBASIC5.68□□□□□ -1.5
CDH3P22223 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH3P22223 GAPDHP14-201ENST00000450472 937 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AL445665.1-202ENST00000452436 324 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AC007386.1-201ENST00000455212 582 ntBASIC5.68□□□□□ -1.5
CDH3P22223 SETP20-201ENST00000457046 852 ntBASIC5.68□□□□□ -1.5
CDH3P22223 RPL7P51-201ENST00000490532 749 ntBASIC5.68□□□□□ -1.5
CDH3P22223 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH3P22223 MTATP6P1-201ENST00000514057 681 ntBASIC5.68□□□□□ -1.5
CDH3P22223 RN7SKP288-201ENST00000516227 268 ntBASIC5.68□□□□□ -1.5
CDH3P22223 RNU6-362P-201ENST00000516736 90 ntBASIC5.68□□□□□ -1.5
CDH3P22223 OR8Q1P-201ENST00000526467 655 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH3P22223 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH3P22223 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH3P22223 GARSP1-201ENST00000570895 719 ntBASIC5.68□□□□□ -1.5
CDH3P22223 MIR3614-201ENST00000581261 86 ntBASIC5.68□□□□□ -1.5
CDH3P22223 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH3P22223 AC009303.3-201ENST00000591103 736 ntBASIC5.68□□□□□ -1.5
CDH3P22223 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH3P22223 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms