Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.85□□□□□ -1.63
CTLA4P16410 RN7SL72P-201ENST00000460697 269 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC109481.1-201ENST00000509173 282 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTLA4P16410 OR8G3P-201ENST00000533406 921 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTLA4P16410 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.85□□□□□ -1.63
CTLA4P16410 OR11H3P-201ENST00000554547 982 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.85□□□□□ -1.63
CTLA4P16410 RBM22P12-201ENST00000567098 1255 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC012616.1-201ENST00000600294 197 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTLA4P16410 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.85□□□□□ -1.63
CTLA4P16410 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC135068.5-201ENST00000624197 983 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC099654.3-201ENST00000447087 1546 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.85□□□□□ -1.63
CTLA4P16410 AC015689.2-201ENST00000528172 1738 ntBASIC4.85□□□□□ -1.63
CTLA4P16410 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.85□□□□□ -1.63
CTLA4P16410 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CTLA4P16410 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CTLA4P16410 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTLA4P16410 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 AC018628.1-201ENST00000624147 3819 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CTLA4P16410 AL353796.1-201ENST00000561542 3241 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 OR13C1P-202ENST00000641378 2919 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CTLA4P16410 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 RN7SKP292-201ENST00000365522 317 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.84□□□□□ -1.63
CTLA4P16410 RPL34P3-201ENST00000421454 338 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 FMO7P-201ENST00000436045 768 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.84□□□□□ -1.63
CTLA4P16410 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 LDHBP2-201ENST00000456969 1005 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 AC094085.1-201ENST00000468914 584 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 IGBP1P4-201ENST00000503202 879 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AC109464.1-201ENST00000511091 819 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AC021193.1-201ENST00000511607 420 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.84□□□□□ -1.63
CTLA4P16410 HMGN1P9-201ENST00000515212 298 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.84□□□□□ -1.63
CTLA4P16410 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.84□□□□□ -1.63
CTLA4P16410 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.84□□□□□ -1.63
CTLA4P16410 AL356608.1-201ENST00000610034 820 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 AC008115.3-201ENST00000614874 549 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AL118522.2-201ENST00000616045 615 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AL353684.1-201ENST00000622677 1120 ntBASIC4.84□□□□□ -1.63
CTLA4P16410 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.84□□□□□ -1.63
CTLA4P16410 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTLA4P16410 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CTLA4P16410 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CTLA4P16410 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CTLA4P16410 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTLA4P16410 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 Z83820.1-201ENST00000456978 1499 ntBASIC4.83□□□□□ -1.64
CTLA4P16410 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CTLA4P16410 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.83□□□□□ -1.64
CTLA4P16410 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.83□□□□□ -1.64
CTLA4P16410 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTLA4P16410 MIR133A2-201ENST00000347538 102 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms