Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL11A1P12107 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
COL11A1P12107 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL11A1P12107 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.12□□□□□ -1.43
COL11A1P12107 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.12□□□□□ -1.43
COL11A1P12107 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.12□□□□□ -1.43
COL11A1P12107 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.12□□□□□ -1.43
COL11A1P12107 RN7SKP66-201ENST00000516681 231 ntBASIC6.12□□□□□ -1.43
COL11A1P12107 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.12□□□□□ -1.43
COL11A1P12107 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 AC002090.1-201ENST00000625000 2138 ntBASIC6.12□□□□□ -1.43
COL11A1P12107 AC073869.8-201ENST00000641806 335 ntBASIC6.12□□□□□ -1.43
COL11A1P12107 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COL11A1P12107 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.12□□□□□ -1.43
COL11A1P12107 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 AC093829.1-201ENST00000506662 1618 ntBASIC6.12□□□□□ -1.43
COL11A1P12107 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.11□□□□□ -1.43
COL11A1P12107 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 AC092017.2-201ENST00000427600 362 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 REG1CP-206ENST00000447469 496 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC092324.1-201ENST00000468671 324 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 HIGD1AP5-201ENST00000529959 259 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC093799.2-201ENST00000610062 578 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AP003789.1-201ENST00000617737 605 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC074101.1-201ENST00000637861 241 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL11A1P12107 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 MFSD8-216ENST00000641147 4009 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL11A1P12107 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL11A1P12107 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.11□□□□□ -1.43
COL11A1P12107 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.11□□□□□ -1.43
COL11A1P12107 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.11□□□□□ -1.43
COL11A1P12107 DDX39BP1-205ENST00000422507 192 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC108161.1-201ENST00000461060 402 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 MIR4691-201ENST00000583764 85 ntBASIC6.11□□□□□ -1.43
COL11A1P12107 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.11□□□□□ -1.43
COL11A1P12107 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.11□□□□□ -1.43
COL11A1P12107 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
COL11A1P12107 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.1□□□□□ -1.43
COL11A1P12107 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.1□□□□□ -1.43
COL11A1P12107 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL11A1P12107 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 AC079097.1-201ENST00000512187 1399 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 AC079777.1-201ENST00000623836 1953 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.1□□□□□ -1.43
COL11A1P12107 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 AL022323.4-201ENST00000623980 13120 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.1□□□□□ -1.43
COL11A1P12107 SNORA70.9-201ENST00000384370 135 ntBASIC6.1□□□□□ -1.43
COL11A1P12107 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL11A1P12107 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
COL11A1P12107 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.1□□□□□ -1.43
COL11A1P12107 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.1□□□□□ -1.43
COL11A1P12107 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL11A1P12107 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms