Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.33□□□□□ -1.88
PKHD1P08F94 RPL23AP1-201ENST00000428990 471 ntBASIC3.33□□□□□ -1.88
PKHD1P08F94 RPS29P10-201ENST00000439197 166 ntBASIC3.33□□□□□ -1.88
PKHD1P08F94 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PKHD1P08F94 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PKHD1P08F94 AC013356.1-201ENST00000489027 564 ntBASIC3.33□□□□□ -1.88
PKHD1P08F94 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.33□□□□□ -1.88
PKHD1P08F94 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC3.33□□□□□ -1.88
PKHD1P08F94 AC006115.2-201ENST00000596823 202 ntBASIC3.33□□□□□ -1.88
PKHD1P08F94 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PKHD1P08F94 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.33□□□□□ -1.88
PKHD1P08F94 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKHD1P08F94 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKHD1P08F94 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 AP000350.7-201ENST00000624923 8030 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AL031651.1-201ENST00000615357 1438 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PKHD1P08F94 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 RPL12P17-201ENST00000432393 498 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.32□□□□□ -1.88
PKHD1P08F94 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 AC105129.1-201ENST00000560250 297 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AC126323.6-202ENST00000568092 3511 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 RN7SKP145-201ENST00000363291 303 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PKHD1P08F94 AL139039.2-201ENST00000407436 479 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AC006946.1-201ENST00000429106 328 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AC073465.2-201ENST00000440938 498 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 RPL6P5-201ENST00000445678 828 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.32□□□□□ -1.88
PKHD1P08F94 AC023818.1-201ENST00000498379 384 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 SAP18P1-201ENST00000512058 390 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 IGKV2-23-201ENST00000518729 323 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.32□□□□□ -1.88
PKHD1P08F94 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.32□□□□□ -1.88
PKHD1P08F94 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 PRICKLE1-213ENST00000639589 5761 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PKHD1P08F94 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 AL122126.1-201ENST00000546905 1318 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PKHD1P08F94 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 AL645608.4-201ENST00000423619 154 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 MRPL35P2-201ENST00000448009 511 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 snoU13.1-201ENST00000459157 104 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC3.32□□□□□ -1.88
PKHD1P08F94 NIFKP7-201ENST00000503365 834 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AC084824.1-201ENST00000550917 1005 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 AL034374.2-201ENST00000605281 548 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.32□□□□□ -1.88
PKHD1P08F94 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC3.32□□□□□ -1.88
PKHD1P08F94 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
PKHD1P08F94 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PKHD1P08F94 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKHD1P08F94 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKHD1P08F94 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.31□□□□□ -1.88
PKHD1P08F94 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC3.31□□□□□ -1.88
PKHD1P08F94 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PKHD1P08F94 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKHD1P08F94 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC3.31□□□□□ -1.88
PKHD1P08F94 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKHD1P08F94 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PKHD1P08F94 RNA5SP191-201ENST00000362585 102 ntBASIC3.31□□□□□ -1.88
PKHD1P08F94 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKHD1P08F94 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.31□□□□□ -1.88
PKHD1P08F94 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PKHD1P08F94 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.31□□□□□ -1.88
PKHD1P08F94 AL358232.1-201ENST00000448030 501 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms