Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SPTA1P02549 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.12□□□□□ -1.59
SPTA1P02549 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
SPTA1P02549 MAPK10-383ENST00000642032 3390 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SPTA1P02549 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 RN7SKP28-201ENST00000364770 305 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SPTA1P02549 SNORA67-201ENST00000384423 137 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 U3.36-201ENST00000408418 213 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 RMRPP5-201ENST00000411156 267 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 AL390774.1-201ENST00000411924 246 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.11□□□□□ -1.59
SPTA1P02549 OR13C1P-201ENST00000457612 963 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.11□□□□□ -1.59
SPTA1P02549 AC021678.3-201ENST00000517893 476 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 AP001521.2-201ENST00000608772 546 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 AC022726.2-201ENST00000634673 547 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SPTA1P02549 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.11□□□□□ -1.59
SPTA1P02549 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 AL162456.1-201ENST00000634535 2006 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 BIN2P1-201ENST00000504996 1530 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 AL359955.1-201ENST00000455242 3275 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 AC005225.5-201ENST00000623547 2225 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SPTA1P02549 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPTA1P02549 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.11□□□□□ -1.59
SPTA1P02549 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.11□□□□□ -1.59
SPTA1P02549 AC073610.1-201ENST00000489971 396 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.11□□□□□ -1.59
SPTA1P02549 AC013701.1-201ENST00000522657 465 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.11□□□□□ -1.59
SPTA1P02549 TAS2R6P-201ENST00000605022 826 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 AC067931.1-201ENST00000624190 671 ntBASIC5.11□□□□□ -1.59
SPTA1P02549 OR55B1P-203ENST00000641518 2602 ntBASIC5.1□□□□□ -1.59
SPTA1P02549 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
SPTA1P02549 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 AL137141.1-201ENST00000624622 4836 ntBASIC5.1□□□□□ -1.59
SPTA1P02549 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC5.1□□□□□ -1.59
SPTA1P02549 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
SPTA1P02549 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 MIR130A-201ENST00000385274 89 ntBASIC5.1□□□□□ -1.59
SPTA1P02549 AL357752.1-201ENST00000412817 349 ntBASIC5.1□□□□□ -1.59
SPTA1P02549 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.1□□□□□ -1.59
SPTA1P02549 AC006946.1-201ENST00000429106 328 ntBASIC5.1□□□□□ -1.59
SPTA1P02549 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.1□□□□□ -1.59
SPTA1P02549 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.1□□□□□ -1.59
SPTA1P02549 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.1□□□□□ -1.59
SPTA1P02549 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SPTA1P02549 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.1□□□□□ -1.59
SPTA1P02549 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.1□□□□□ -1.59
SPTA1P02549 AC091932.2-201ENST00000623014 291 ntBASIC5.1□□□□□ -1.59
SPTA1P02549 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SPTA1P02549 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.1□□□□□ -1.59
SPTA1P02549 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SPTA1P02549 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SPTA1P02549 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SPTA1P02549 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SPTA1P02549 AL353625.1-202ENST00000366273 571 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.09□□□□□ -1.59
SPTA1P02549 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.09□□□□□ -1.59
SPTA1P02549 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 AC093655.2-201ENST00000425735 631 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.09□□□□□ -1.59
SPTA1P02549 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 AC073581.1-201ENST00000519036 575 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.09□□□□□ -1.59
SPTA1P02549 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 AC114947.2-201ENST00000565748 2125 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.09□□□□□ -1.59
SPTA1P02549 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SPTA1P02549 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SPTA1P02549 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms