Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
PDGFBP01127 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDGFBP01127 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 RNU1-43P-201ENST00000365052 165 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.79□□□□□ -1.48
PDGFBP01127 AL034379.1-201ENST00000423216 253 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AC108075.1-201ENST00000424692 529 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFBP01127 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.79□□□□□ -1.48
PDGFBP01127 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFBP01127 AL389915.2-201ENST00000454576 441 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AC092905.1-201ENST00000467527 949 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AC016687.1-201ENST00000482574 353 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFBP01127 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.79□□□□□ -1.48
PDGFBP01127 BRD9P1-201ENST00000529855 560 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 BNIP3P1-201ENST00000547295 580 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AC106730.2-201ENST00000566641 540 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 MIR3934-201ENST00000579806 107 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.79□□□□□ -1.48
PDGFBP01127 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 AL118522.2-201ENST00000616045 615 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AC010435.1-201ENST00000623353 1177 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 MFSD8-219ENST00000641228 2559 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDGFBP01127 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 AC005034.3-201ENST00000604845 1747 ntBASIC5.79□□□□□ -1.48
PDGFBP01127 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.79□□□□□ -1.48
PDGFBP01127 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDGFBP01127 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 AL353763.1-201ENST00000624467 1628 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 RNU4-4P-201ENST00000364588 130 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDGFBP01127 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 AC073072.2-201ENST00000447425 348 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 RPS3AP41-201ENST00000462701 778 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 RN7SL459P-201ENST00000481078 302 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 CCDC11P1-201ENST00000503137 1162 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 RFPL4AP3-201ENST00000515267 345 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 RN7SKP99-201ENST00000517028 307 ntBASIC5.78□□□□□ -1.48
PDGFBP01127 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.78□□□□□ -1.48
PDGFBP01127 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PDGFBP01127 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PDGFBP01127 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.78□□□□□ -1.48
PDGFBP01127 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDGFBP01127 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.77□□□□□ -1.48
PDGFBP01127 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
PDGFBP01127 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PDGFBP01127 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.77□□□□□ -1.49
PDGFBP01127 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDGFBP01127 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.77□□□□□ -1.49
PDGFBP01127 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.77□□□□□ -1.49
PDGFBP01127 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms