Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CYP4F27P-201ENST00000514557 494 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 AC008429.2-201ENST00000523057 864 ntBASIC8.43□□□□□ -1.06
RNF40O75150 RNF185-AS1-201ENST00000526089 353 ntBASIC8.43□□□□□ -1.06
RNF40O75150 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 AC010547.7-201ENST00000570323 333 ntBASIC8.43□□□□□ -1.06
RNF40O75150 RN7SL237P-201ENST00000580912 287 ntBASIC8.43□□□□□ -1.06
RNF40O75150 RN7SL25P-201ENST00000583862 260 ntBASIC8.43□□□□□ -1.06
RNF40O75150 KPNA2P3-201ENST00000584190 848 ntBASIC8.43□□□□□ -1.06
RNF40O75150 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 AC010719.1-201ENST00000602992 747 ntBASIC8.43□□□□□ -1.06
RNF40O75150 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 RMST_7.1-201ENST00000621935 268 ntBASIC8.43□□□□□ -1.06
RNF40O75150 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 BX322650.1-201ENST00000332359 2143 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 MFSD8-217ENST00000641178 4374 ntBASIC8.42□□□□□ -1.06
RNF40O75150 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 AC114324.1-201ENST00000504077 3152 ntBASIC8.42□□□□□ -1.06
RNF40O75150 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 SNORA51.12-201ENST00000384448 134 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AL356057.3-201ENST00000402607 340 ntBASIC8.42□□□□□ -1.06
RNF40O75150 MIR1231-201ENST00000408101 92 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 OR5W1P-201ENST00000423705 938 ntBASIC8.42□□□□□ -1.06
RNF40O75150 BX890604.2-201ENST00000427883 474 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 KRTAP9-11P-201ENST00000431013 525 ntBASIC8.42□□□□□ -1.06
RNF40O75150 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 AC002486.1-201ENST00000435098 391 ntBASIC8.42□□□□□ -1.06
RNF40O75150 EFCAB14P1-201ENST00000442409 463 ntBASIC8.42□□□□□ -1.06
RNF40O75150 ARMC8P1-201ENST00000443069 1289 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AL157827.1-201ENST00000447622 132 ntBASIC8.42□□□□□ -1.06
RNF40O75150 OR7H1P-201ENST00000448965 922 ntBASIC8.42□□□□□ -1.06
RNF40O75150 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.42□□□□□ -1.06
RNF40O75150 RNU6-420P-201ENST00000458780 107 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 RPL7P19-201ENST00000469948 618 ntBASIC8.42□□□□□ -1.06
RNF40O75150 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 THAP6-203ENST00000502620 582 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 SDHCP4-201ENST00000532834 510 ntBASIC8.42□□□□□ -1.06
RNF40O75150 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 RN7SL376P-201ENST00000578594 264 ntBASIC8.42□□□□□ -1.06
RNF40O75150 MIR4786-201ENST00000583954 80 ntBASIC8.42□□□□□ -1.06
RNF40O75150 NDUFA3P1-201ENST00000588007 252 ntBASIC8.42□□□□□ -1.06
RNF40O75150 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 AL355472.4-201ENST00000610233 626 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AC245028.3-201ENST00000618197 285 ntBASIC8.42□□□□□ -1.06
RNF40O75150 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.42□□□□□ -1.06
RNF40O75150 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RNF40O75150 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.42□□□□□ -1.06
RNF40O75150 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 CYP1D1P-201ENST00000416662 1433 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AC114786.2-201ENST00000510090 1426 ntBASIC8.42□□□□□ -1.06
RNF40O75150 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RNF40O75150 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.42□□□□□ -1.06
RNF40O75150 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms