Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 FDPSP1-201ENST00000424976 1071 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AL353729.1-201ENST00000425044 720 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 MTCO3P20-201ENST00000454926 688 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 AC007537.2-201ENST00000472093 511 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 RN7SL332P-201ENST00000482163 254 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 NPM1P27-201ENST00000502784 830 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 KCTD9P5-201ENST00000504141 1170 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 AC109635.6-201ENST00000525487 1113 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AC022690.1-201ENST00000526681 550 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 GTF2IP11-201ENST00000526931 420 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 HPRT1P3-201ENST00000539521 576 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 AL390334.1-201ENST00000556395 450 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 AC011712.1-201ENST00000588959 234 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.19□□□□□ -1.1
HOXA2O43364 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 PRELID3BP8-201ENST00000604148 295 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AL136139.1-201ENST00000605568 222 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AL132765.2-201ENST00000610812 351 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 YWHAEP7-203ENST00000622054 312 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AC129908.1-201ENST00000624553 648 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
HOXA2O43364 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.19□□□□□ -1.1
HOXA2O43364 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 AC107982.1-201ENST00000507171 1300 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 OR5BR1P-201ENST00000524992 1330 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.19□□□□□ -1.1
HOXA2O43364 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 AC012360.3-201ENST00000610036 3449 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
HOXA2O43364 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.19□□□□□ -1.1
HOXA2O43364 CDR1-202ENST00000625883 1485 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXA2O43364 AC093297.3-201ENST00000607056 2517 ntBASIC8.19□□□□□ -1.1
HOXA2O43364 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.18□□□□□ -1.1
HOXA2O43364 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
HOXA2O43364 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 RN7SKP63-201ENST00000363187 301 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
HOXA2O43364 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 SNORA11C-201ENST00000408532 129 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 RN7SKP131-201ENST00000410698 301 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 AC092042.2-201ENST00000417304 331 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 FTOP1-201ENST00000419363 861 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 FCF1P1-201ENST00000432690 571 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 AC104306.1-201ENST00000449702 371 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.18□□□□□ -1.1
HOXA2O43364 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXA2O43364 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HOXA2O43364 RN7SL37P-201ENST00000490461 307 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 RNA5SP216-201ENST00000516111 123 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 snoU109.5-201ENST00000516231 132 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXA2O43364 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC8.18□□□□□ -1.1
HOXA2O43364 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.18□□□□□ -1.1
HOXA2O43364 AC078814.3-201ENST00000553036 491 ntBASIC8.18□□□□□ -1.1
HOXA2O43364 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms