Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CEACAMP11-201ENST00000455211 583 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC004890.1-201ENST00000461005 181 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL122020.1-201ENST00000472287 459 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC113367.2-201ENST00000505749 160 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 ENPP7P11-201ENST00000505915 627 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 DUTP7-201ENST00000507982 486 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC016559.2-201ENST00000510759 359 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 RNA5SP441-201ENST00000516809 88 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC021678.3-201ENST00000517893 476 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 WBP1LP3-201ENST00000523033 208 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AC006530.1-201ENST00000555980 571 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AL356801.1-201ENST00000559320 294 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AC106730.2-201ENST00000566641 540 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 RN7SL230P-201ENST00000580835 303 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AC245014.3-201ENST00000618589 347 ntBASIC5.81□□□□□ -1.48
CCDC188H7C350 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC188H7C350 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC188H7C350 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CCDC188H7C350 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC188H7C350 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC188H7C350 GTF2IP4-201ENST00000453092 2054 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AL159987.1-201ENST00000347911 293 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 RNA5SP30-201ENST00000365552 115 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 SNORA51.9-201ENST00000384295 124 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AL009179.1-201ENST00000406085 265 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 NENFP1-201ENST00000419476 466 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 RCC2P2-201ENST00000422174 918 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AL392003.1-201ENST00000434394 243 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 RPL5P7-201ENST00000444235 813 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AC007383.1-201ENST00000445875 636 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC090804.1-201ENST00000448870 490 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC188H7C350 RPS17P15-201ENST00000475609 349 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 RPL32P33-201ENST00000487023 394 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC188H7C350 AC002519.2-203ENST00000567043 837 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 FAM72A-208ENST00000607379 1139 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 AL365181.4-201ENST00000609800 547 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AL590410.1-201ENST00000617925 333 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AC091932.2-201ENST00000623014 291 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 AC022919.1-201ENST00000624979 626 ntBASIC5.8□□□□□ -1.48
CCDC188H7C350 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC188H7C350 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC188H7C350 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC188H7C350 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC188H7C350 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC188H7C350 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC188H7C350 DDX18P6-201ENST00000450119 1997 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC188H7C350 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC188H7C350 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC188H7C350 OR9K1P-201ENST00000326513 941 ntBASIC5.79□□□□□ -1.48
CCDC188H7C350 MIR130B-202ENST00000385018 82 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms