Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC072052.1-201ENST00000496556 306 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 HIGD1AP14-201ENST00000507617 282 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 HMGB1P40-201ENST00000525121 540 ntBASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SMIM28A0A1B0GU29 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 RNU4-34P-201ENST00000410431 124 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AL139148.1-201ENST00000427122 680 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 LYPLA1P1-201ENST00000434514 622 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 RPS23P9-201ENST00000448848 438 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 RN7SL188P-201ENST00000469842 285 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC008953.1-201ENST00000497334 318 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC093763.2-201ENST00000505334 1223 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC006499.3-201ENST00000506077 748 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 RNU6-941P-201ENST00000516346 108 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AP004607.2-201ENST00000533949 322 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC084824.2-201ENST00000548906 345 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 AC009237.13-201ENST00000603193 276 ntBASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMIM28A0A1B0GU29 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 DNM1P47-203ENST00000571780 12667 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AL353796.1-201ENST00000561542 3241 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC109780.1-201ENST00000451768 1344 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 U3.2-201ENST00000362981 210 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 MIR105-2-201ENST00000385083 81 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 SPTLC1P2-201ENST00000407089 121 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 RPL12P17-201ENST00000432393 498 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 LINC02210-201ENST00000444561 288 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AL035090.1-201ENST00000454835 332 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 RN7SL515P-201ENST00000463999 297 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC109464.1-201ENST00000511091 819 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC051619.2-201ENST00000559063 397 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 RPL10P14-201ENST00000565265 298 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 AC073869.8-201ENST00000641806 335 ntBASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.85□□□□□ -1.47
SMIM28A0A1B0GU29 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 ZNF658B-201ENST00000602828 3408 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC140479.2-201ENST00000421567 3130 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AC006600.2-201ENST00000624834 2506 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 AP001157.1-201ENST00000550837 2339 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 SNORA67-201ENST00000384423 137 ntBASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.84□□□□□ -1.47
SMIM28A0A1B0GU29 BRWD1P3-201ENST00000428816 390 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms