Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 Z83820.1-201ENST00000456978 1499 ntBASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAV27A0A087WT01 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC093671.1-201ENST00000624981 2929 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 RN7SKP6-201ENST00000364795 319 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 RPL5P25-201ENST00000441148 775 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL450996.1-201ENST00000445574 1202 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 EEF1B2P6-201ENST00000445713 673 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL450023.1-201ENST00000450868 751 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 LRRC37A14P-201ENST00000452297 462 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL445665.1-202ENST00000452436 324 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 IGKV2-4-201ENST00000523070 340 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC134669.1-201ENST00000581275 672 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC012616.1-201ENST00000600294 197 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL356608.1-201ENST00000610034 820 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC244107.2-201ENST00000611773 76 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 MIR193BHG-214ENST00000641765 509 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 LINC02019-201ENST00000608605 2060 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AL450345.1-202ENST00000605741 3881 ntBASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAV27A0A087WT01 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
TRAV27A0A087WT01 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 SNORA16A-201ENST00000384342 137 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 RNA5SP187-201ENST00000384400 119 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 GAPDHP42-201ENST00000406848 981 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 RPL7AP49-201ENST00000429522 581 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 AL591438.1-201ENST00000433508 581 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 RPL19P16-201ENST00000433839 588 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 RN7SL649P-201ENST00000496974 275 ntBASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRAV27A0A087WT01 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms