Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 MIR375-201ENST00000362103 64 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AL357752.1-201ENST00000412817 349 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC245060.4-201ENST00000413293 1121 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RNF10P1-201ENST00000418589 369 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 BX323845.3-201ENST00000428215 527 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 HLA-DPA3-207ENST00000454398 229 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 SNORA70.20-201ENST00000516848 126 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AP001496.3-201ENST00000580230 913 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RPL12P48-201ENST00000605620 304 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC090607.5-201ENST00000615692 224 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RN7SL544P-201ENST00000617232 284 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RN7SL763P-201ENST00000620922 284 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 FRG1EP-201ENST00000634469 770 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 AC106872.5-201ENST00000508856 1416 ntBASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 AC073136.1-201ENST00000449426 2884 ntBASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAPPC4Q9Y296 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 OR52B3P-201ENST00000314715 928 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AL159987.1-201ENST00000347911 293 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 RAB5CP1-201ENST00000395972 580 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 EEF1B2P8-201ENST00000414101 671 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC022215.1-201ENST00000481770 362 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC073610.1-201ENST00000489971 396 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC009120.1-201ENST00000493458 473 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 MIR7853-201ENST00000584820 132 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 MIR6778-201ENST00000617912 73 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AL035661.1-201ENST00000620459 1144 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 AC011933.2-201ENST00000578539 2790 ntBASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRAPPC4Q9Y296 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.14□□□□□ -1.59
TRAPPC4Q9Y296 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms