Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC079922.1-201ENST00000443291 359 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC105254.2-201ENST00000603636 436 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 CR381572.2-201ENST00000624852 397 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC104118.1-201ENST00000607625 1589 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC092070.2-203ENST00000598377 3644 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC122688.1-201ENST00000541494 223 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC098935.2-201ENST00000604222 466 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 AC092653.1-201ENST00000608509 531 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 MIR6716-201ENST00000613413 80 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.51□□□□□ -1.53
CHD7Q9P2D1 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CHD7Q9P2D1 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 RNU4-39P-201ENST00000362455 127 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 HSPA8P15-201ENST00000401676 786 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 MEMO1P4-201ENST00000453590 386 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 RPL10P17-201ENST00000453852 316 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AC091180.1-201ENST00000462104 372 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AC005962.2-201ENST00000611427 652 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 ZNF840P-201ENST00000504759 1996 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 MIR23A-201ENST00000385245 73 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 snoU13.1-201ENST00000459157 104 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AC099654.6-201ENST00000636487 512 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 AL008638.3-201ENST00000623027 5182 ntBASIC5.5□□□□□ -1.53
CHD7Q9P2D1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD7Q9P2D1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 SNORD8-201ENST00000363915 110 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 RIMKLBP2-201ENST00000424737 654 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 RPL12P17-201ENST00000432393 498 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CHD7Q9P2D1 MIR600-201ENST00000385007 98 ntBASIC5.49□□□□□ -1.53
CHD7Q9P2D1 RSU1P3-201ENST00000412878 835 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms