Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 CYP2C60P-201ENST00000566088 139 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 MTCO2P22-201ENST00000603246 681 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 RPL17P3-201ENST00000605695 525 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 AC087565.3-203ENST00000641018 837 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 MFSD8-245ENST00000641743 948 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 KARSP1-201ENST00000451871 1752 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 FOLH1B-202ENST00000529567 2145 ntBASIC6.82□□□□□ -1.32
SSU72Q9NP77 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SSU72Q9NP77 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.82□□□□□ -1.32
SSU72Q9NP77 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC010132.2-201ENST00000295493 1043 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AL451142.1-201ENST00000375867 775 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 RNA5SP297-201ENST00000391029 113 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC093719.1-202ENST00000392735 373 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 RPL23AP59-201ENST00000399415 461 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 MTCO3P31-201ENST00000405526 789 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 PPIAP30-201ENST00000415473 519 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 CYCSP46-201ENST00000423569 204 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC130472.1-201ENST00000427885 309 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 RPSAP62-201ENST00000432596 833 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AL035458.1-201ENST00000433096 585 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC010240.2-201ENST00000445363 1205 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 NPM1P9-201ENST00000453156 844 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 TCEAL4P1-201ENST00000453620 588 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC092824.1-201ENST00000483524 576 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC109471.1-201ENST00000511631 612 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 RNU6-678P-201ENST00000516832 109 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 BCAS2P1-201ENST00000528022 632 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 OR4A43P-201ENST00000532938 908 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC018523.1-201ENST00000534211 512 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 NPM1P5-201ENST00000557228 838 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC134669.1-201ENST00000581275 672 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 RN7SL155P-201ENST00000581538 263 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC008507.1-201ENST00000587506 734 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC018618.2-201ENST00000604770 446 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AL139123.1-201ENST00000612008 430 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC048341.3-201ENST00000619323 491 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC135068.5-201ENST00000624197 983 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.81□□□□□ -1.32
SSU72Q9NP77 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SSU72Q9NP77 AC089998.1-201ENST00000548575 3141 ntBASIC6.81□□□□□ -1.32
SSU72Q9NP77 AL451064.2-201ENST00000623514 1654 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms