Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
NXF3Q9H4D5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
NXF3Q9H4D5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NXF3Q9H4D5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
NXF3Q9H4D5 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6□□□□□ -1.45
NXF3Q9H4D5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NXF3Q9H4D5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NXF3Q9H4D5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NXF3Q9H4D5 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NXF3Q9H4D5 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6□□□□□ -1.45
NXF3Q9H4D5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
NXF3Q9H4D5 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 TTC41P-205ENST00000551270 3963 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 MIR133B-201ENST00000362210 119 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC026348.1-201ENST00000462549 1053 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 RN7SL727P-201ENST00000482164 296 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 PGAM1P13-201ENST00000507497 754 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC099654.11-201ENST00000638857 294 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.99□□□□□ -1.45
NXF3Q9H4D5 AC109780.1-201ENST00000451768 1344 ntBASIC5.99□□□□□ -1.45
NXF3Q9H4D5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC239868.2-201ENST00000564237 4527 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AL592429.1-201ENST00000403909 1473 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 RPL7P58-201ENST00000402913 758 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 PRUNEP1-201ENST00000425846 705 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 BRWD1P3-201ENST00000428816 390 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 KRT8P51-201ENST00000438938 274 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC105399.1-202ENST00000447303 205 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 PDCL3P4-201ENST00000489621 720 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC008953.1-201ENST00000497334 318 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 HIGD1AP14-201ENST00000507617 282 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 RNA5SP92-201ENST00000516437 110 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 RBM22P1-201ENST00000578589 1214 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 BX323046.1-201ENST00000610145 535 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC018445.2-201ENST00000622987 260 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 SAMMSON-209ENST00000641222 1100 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NXF3Q9H4D5 AC090220.1-201ENST00000593078 1699 ntBASIC5.98□□□□□ -1.45
NXF3Q9H4D5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.97□□□□□ -1.45
NXF3Q9H4D5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
NXF3Q9H4D5 RNA5SP339-201ENST00000390987 122 ntBASIC5.97□□□□□ -1.45
NXF3Q9H4D5 RNF10P1-201ENST00000418589 369 ntBASIC5.97□□□□□ -1.45
NXF3Q9H4D5 AL133325.1-201ENST00000421090 382 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms