Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 LINC02019-201ENST00000608605 2060 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC079097.1-201ENST00000512187 1399 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC092681.1-201ENST00000297369 291 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 RN7SKP145-201ENST00000363291 303 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC092642.1-201ENST00000392417 425 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 RPSAP35-201ENST00000413753 818 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 RPL34P3-201ENST00000421454 338 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 Z84478.1-201ENST00000438230 1219 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC073465.2-201ENST00000440938 498 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AL450996.1-201ENST00000445574 1202 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 HMGN1P36-201ENST00000446623 298 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 VDAC2P4-201ENST00000452925 711 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 RN7SL583P-201ENST00000475692 287 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 RNA5SP440-201ENST00000612665 119 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 RNA5SP439-201ENST00000617595 124 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC021766.1-201ENST00000624404 741 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AP000550.3-201ENST00000637734 379 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AC114786.1-201ENST00000512892 1415 ntBASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCSER1Q9C0I3 CASC19-260ENST00000641828 2001 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 RNA5SP46-201ENST00000362370 120 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL596448.1-201ENST00000415024 392 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL133482.1-201ENST00000415988 498 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 MTND2P40-201ENST00000436718 841 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 MED28P3-201ENST00000444288 531 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL161636.2-201ENST00000445179 927 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 RNU6-1334P-201ENST00000516032 105 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 TMEM97P2-201ENST00000517841 403 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 IGLVIV-64-201ENST00000518581 301 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 NRBF2P4-201ENST00000520874 850 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC079064.1-201ENST00000528365 362 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC010547.6-201ENST00000571789 193 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC012146.2-201ENST00000576545 416 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 PPATP2-201ENST00000605635 508 ntBASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.23□□□□□ -1.41
CCSER1Q9C0I3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 MIR551A-201ENST00000385042 96 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AL512422.1-201ENST00000407033 553 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 AL133173.1-201ENST00000423458 397 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 BX119321.1-201ENST00000428912 797 ntBASIC6.22□□□□□ -1.41
CCSER1Q9C0I3 OR6D1P-201ENST00000436165 939 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms