Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 USP13-203ENST00000496897 2747 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 TDGF1P3-202ENST00000602699 2710 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 FAM205BP-202ENST00000399773 4009 ntBASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC4.36□□□□□ -1.71
KRTAP3-1Q9BYR8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC096921.2-201ENST00000561507 1916 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU6-593P-201ENST00000364716 112 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SNORA71A-201ENST00000364729 134 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 MRPL55-216ENST00000366744 726 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SNORA75B-201ENST00000384053 137 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 Y_RNA.463-201ENST00000384271 102 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU6-33P-201ENST00000384793 107 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 MIR1208-201ENST00000408334 73 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RPSAP21-201ENST00000414293 885 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC007562.1-201ENST00000421819 517 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SKA2P1-201ENST00000425592 390 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SDAD1P3-201ENST00000427380 333 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AL023653.1-201ENST00000432513 326 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 PIGCP2-201ENST00000433617 835 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SNX18P2-201ENST00000438540 808 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RPS29P3-201ENST00000439929 171 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC093156.1-201ENST00000440382 670 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 DNAJC19P5-201ENST00000443295 316 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL36AP15-201ENST00000444514 266 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC073109.1-201ENST00000445066 978 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC002366.1-201ENST00000446186 1190 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 PCNPP5-201ENST00000452246 481 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SNX18P4-201ENST00000456554 838 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU7-182P-201ENST00000459009 62 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 TAF8-205ENST00000465926 1222 ntTSL 2 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RPS20P21-201ENST00000466859 343 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC008571.1-201ENST00000467232 300 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC105265.1-201ENST00000479379 179 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC068781.1-201ENST00000488231 618 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RPL23AP72-201ENST00000492447 435 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC084398.1-201ENST00000494902 459 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC090453.1-201ENST00000495560 436 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC008638.1-201ENST00000506035 866 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RNU6-202P-201ENST00000515998 96 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RN7SKP99-201ENST00000517028 307 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 Y_RNA.721-201ENST00000517207 102 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC087854.1-201ENST00000519706 414 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AP005435.4-201ENST00000529514 284 ntBASIC4.35□□□□□ -1.71
KRTAP3-1Q9BYR8 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms