Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 SDC4P-201ENST00000453285 601 ntBASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 IMPA1P1-201ENST00000510718 842 ntBASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 AC022784.5-201ENST00000522241 437 ntBASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 MIR4260-201ENST00000583107 67 ntBASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CHMP4AQ9BY43 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 MT-TP-201ENST00000387461 68 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 EEF1B2P8-201ENST00000414101 671 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC009302.1-201ENST00000417147 390 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC015977.1-201ENST00000418887 292 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 RPS4XP5-201ENST00000419038 768 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AK4P4-201ENST00000419465 646 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AL445665.1-202ENST00000452436 324 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC096741.1-201ENST00000472250 846 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 MTND3P6-201ENST00000485242 339 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AL163952.1-202ENST00000569625 600 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AL355974.3-201ENST00000617383 467 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 U1.31-201ENST00000620022 160 ntBASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CHMP4AQ9BY43 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 RNU6-225P-201ENST00000384613 103 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 RPS26P13-201ENST00000419030 330 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 NDUFS5P5-201ENST00000437256 321 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 ACA64.4-201ENST00000459070 127 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 RN7SL57P-201ENST00000493687 290 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AP001804.1-201ENST00000526868 919 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AC009237.12-201ENST00000604755 742 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AC015982.1-201ENST00000608113 465 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 WDR95P-201ENST00000425638 1542 ntBASIC7.62□□□□□ -1.19
CHMP4AQ9BY43 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms