Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL133370.2-201ENST00000619934 439 ntBASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 MIR8080-201ENST00000622224 89 ntBASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 AC079298.2-201ENST00000623885 459 ntBASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 CASC19-222ENST00000641321 1173 ntBASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RTFDC1Q9BY42 AC012078.1-201ENST00000405035 1646 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AL356317.1-201ENST00000396110 1436 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC114786.1-201ENST00000512892 1415 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 RNA5SP234-201ENST00000363916 119 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC009804.1-201ENST00000400949 179 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 NACAP7-201ENST00000407371 609 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AL357752.1-201ENST00000412817 349 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AL121882.1-201ENST00000422893 417 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 SEC63P1-201ENST00000425785 1258 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC046176.1-201ENST00000435260 1170 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 MTND2P21-201ENST00000436242 1042 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AL450996.1-201ENST00000445574 1202 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 LDHBP2-201ENST00000456969 1005 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 OR2AO1P-201ENST00000476497 403 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC096754.1-201ENST00000508904 818 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 SUGT1P3-202ENST00000604259 383 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 MIR6837-201ENST00000620884 64 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 CCAT2-201ENST00000630920 1752 ntBASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.12□□□□□ -1.27
RTFDC1Q9BY42 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 RNA5SP443-201ENST00000363083 132 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 RPS27P18-201ENST00000431701 247 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 EEF1B2P5-201ENST00000444820 548 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 OTX2P1-201ENST00000450956 354 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 RFPL4AP3-201ENST00000515267 345 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AC079148.1-201ENST00000565944 819 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AC005840.5-201ENST00000619166 599 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 AC008115.4-201ENST00000619780 775 ntBASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
RTFDC1Q9BY42 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 DOCK11P1-201ENST00000553480 5932 ntBASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RTFDC1Q9BY42 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms