Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC022919.1-201ENST00000624979 626 ntBASIC5.31□□□□□ -1.56
COL21A1Q96P44 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.31□□□□□ -1.56
COL21A1Q96P44 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.31□□□□□ -1.56
COL21A1Q96P44 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 AC007938.2-201ENST00000604666 2634 ntBASIC5.31□□□□□ -1.56
COL21A1Q96P44 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 AL360270.2-201ENST00000562952 5985 ntBASIC5.31□□□□□ -1.56
COL21A1Q96P44 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.31□□□□□ -1.56
COL21A1Q96P44 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.31□□□□□ -1.56
COL21A1Q96P44 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL21A1Q96P44 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC005522.1-201ENST00000395416 346 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AL022331.1-201ENST00000429025 477 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 TMEM183AP1-205ENST00000432739 290 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC022215.1-201ENST00000481770 362 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC096996.1-201ENST00000563813 325 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 DHFRP1-201ENST00000579682 559 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 AP001496.3-201ENST00000580230 913 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC015982.1-201ENST00000608113 465 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 AC090607.5-201ENST00000615692 224 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 RN7SL544P-201ENST00000617232 284 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 RN7SL763P-201ENST00000620922 284 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
COL21A1Q96P44 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL21A1Q96P44 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.3□□□□□ -1.56
COL21A1Q96P44 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC091305.2-201ENST00000624049 1576 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 RNA5SP326-201ENST00000363209 110 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL21A1Q96P44 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 NIFKP3-201ENST00000417799 865 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 HMGN2P27-201ENST00000427352 270 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC079807.1-201ENST00000429993 481 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 ABCC13-202ENST00000463099 3842 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC090568.1-201ENST00000509499 856 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 RNA5SP230-201ENST00000517039 122 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC021678.3-201ENST00000517893 476 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC016839.1-201ENST00000578162 867 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.29□□□□□ -1.56
COL21A1Q96P44 MIR4660-201ENST00000583549 74 ntBASIC5.29□□□□□ -1.56
COL21A1Q96P44 AC015802.2-201ENST00000589690 189 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms