Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC006116.7-201ENST00000590141 756 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AP001437.1-201ENST00000608783 456 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC104763.3-201ENST00000613765 618 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AL138955.1-201ENST00000622881 1040 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC097460.3-201ENST00000623099 442 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 PSG10P-201ENST00000501199 1500 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 IMMTP1-201ENST00000435590 2219 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC003985.2-201ENST00000562268 1669 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 CDC27P2-201ENST00000425026 1922 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 QRSL1P1-201ENST00000400977 1540 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL035405.1-201ENST00000400795 710 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 RNA5SP431-201ENST00000410312 120 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 MARK2P12-201ENST00000420129 585 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL445928.1-201ENST00000435545 222 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 RPS3AP38-201ENST00000435889 763 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AMYP1-201ENST00000440059 1023 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL663074.2-201ENST00000440621 479 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC006326.1-201ENST00000445465 787 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 RAB28P3-201ENST00000448325 597 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 BUD31P2-201ENST00000449374 300 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL603882.1-201ENST00000463059 681 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 SNORA76.2-201ENST00000517095 137 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC067904.2-201ENST00000517322 1283 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 IGKV3D-25-201ENST00000519599 235 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC006512.2-201ENST00000543250 486 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 RPA2P1-201ENST00000556557 721 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC007346.2-201ENST00000564816 892 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AP005119.1-201ENST00000580956 292 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC008507.3-201ENST00000585753 472 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC025016.1-201ENST00000616746 682 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AP000943.4-201ENST00000622912 357 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 SNX18P12-201ENST00000624821 759 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 AC093297.3-201ENST00000607056 2517 ntBASIC6.68□□□□□ -1.34
CDK5RAP3Q96JB5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AL121839.2-201ENST00000565058 6943 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 RPS26P38-201ENST00000414476 348 ntBASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.67□□□□□ -1.34
CDK5RAP3Q96JB5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms