Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 IGLV3-30-201ENST00000524362 298 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC024405.1-201ENST00000532521 1042 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC122134.1-201ENST00000565664 1104 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 NPM1P45-201ENST00000583151 559 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC008833.1-201ENST00000611633 691 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDLIM5Q96HC4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AP002512.4-202ENST00000641599 4530 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 OR4F13P-202ENST00000560066 2054 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 RN7SKP187-201ENST00000365536 330 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC005042.1-201ENST00000393397 800 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 TRIM60P17-201ENST00000415181 719 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 NENFP1-201ENST00000419476 466 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AL022331.1-201ENST00000429025 477 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC110602.1-201ENST00000437414 318 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 RPSAP37-201ENST00000470913 821 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 MIR4271-201ENST00000582451 67 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC063977.5-201ENST00000601044 974 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 FAM27E4-201ENST00000605259 342 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC015922.4-201ENST00000612568 690 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC090607.5-201ENST00000615692 224 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 AC239868.2-201ENST00000564237 4527 ntBASIC5.59□□□□□ -1.51
PDLIM5Q96HC4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDLIM5Q96HC4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PDLIM5Q96HC4 AC011933.2-201ENST00000578539 2790 ntBASIC5.59□□□□□ -1.52
PDLIM5Q96HC4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PDLIM5Q96HC4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AC010132.2-201ENST00000295493 1043 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 TMSB4XP2-201ENST00000335179 210 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AL121886.1-201ENST00000358609 435 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 RN7SKP185-201ENST00000362813 326 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 RNU4-23P-201ENST00000362839 140 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 MT-RNR1-201ENST00000389680 954 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AC096921.1-201ENST00000411661 375 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 MTATP6P19-201ENST00000413797 659 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 DSTNP5-201ENST00000427921 523 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 UBE2V2P3-201ENST00000433562 437 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AC138761.5-201ENST00000433967 325 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AC099670.2-201ENST00000435130 321 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 PCBP2P1-201ENST00000437262 977 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AL512637.1-201ENST00000439523 1231 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 AL596266.1-201ENST00000448132 400 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 RN7SL168P-201ENST00000463821 279 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 RPS3AP15-201ENST00000483874 781 ntBASIC5.58□□□□□ -1.52
PDLIM5Q96HC4 RPL32P33-201ENST00000487023 394 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms