Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 MIR365B-201ENST00000362317 111 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 SNORA77.2-201ENST00000408571 112 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 MTCO1P51-201ENST00000427672 1060 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 PPIAP10-201ENST00000438675 458 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 SOCS5P1-201ENST00000440415 949 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 RPL7L1P3-201ENST00000455249 689 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 RN7SL326P-201ENST00000477493 296 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 SETP6-201ENST00000479329 568 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 MTCYBP35-201ENST00000503630 1137 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 MTCO1P31-201ENST00000506355 492 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 TPM3P3-201ENST00000521343 354 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 KCTD9P6-201ENST00000522306 950 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC037479.1-201ENST00000558361 625 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC010547.7-201ENST00000570323 333 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 BNIP3P24-201ENST00000593398 557 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC234772.3-201ENST00000602277 528 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AL606834.3-201ENST00000602615 496 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC022022.2-201ENST00000602989 360 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC015849.2-201ENST00000605738 409 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 AC026741.1-201ENST00000605892 482 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC079395.3-201ENST00000615161 484 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 U6.48-201ENST00000618523 106 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC093671.1-201ENST00000624981 2929 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
ERCC4Q92889 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC011933.2-201ENST00000578539 2790 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
ERCC4Q92889 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 AC087516.1-201ENST00000561236 2428 ntBASIC6.88□□□□□ -1.31
ERCC4Q92889 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
ERCC4Q92889 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ERCC4Q92889 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.88□□□□□ -1.31
ERCC4Q92889 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 SMG1P5-202ENST00000529428 4219 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 SMG1P2-201ENST00000566127 4221 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.87□□□□□ -1.31
ERCC4Q92889 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ERCC4Q92889 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC4Q92889 RPL22P22-201ENST00000395439 379 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 RANP4-201ENST00000413361 655 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 AC092865.3-201ENST00000425390 1026 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 IGLV3-4-201ENST00000432300 244 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 MTND2P5-201ENST00000432656 1006 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AL365220.1-201ENST00000432923 399 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AC092447.2-201ENST00000435487 669 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 NPM1P23-201ENST00000440193 849 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AL031681.1-201ENST00000443304 400 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 EIF2S2P2-201ENST00000447161 982 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 KF459542.1-201ENST00000450908 553 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 RPL5P23-201ENST00000496040 868 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.87□□□□□ -1.31
ERCC4Q92889 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.87□□□□□ -1.31
ERCC4Q92889 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
ERCC4Q92889 OR4A17P-201ENST00000526032 904 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.87□□□□□ -1.31
ERCC4Q92889 AC244502.2-201ENST00000543361 851 ntBASIC6.87□□□□□ -1.31
ERCC4Q92889 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.87□□□□□ -1.31
ERCC4Q92889 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.87□□□□□ -1.31
ERCC4Q92889 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.87□□□□□ -1.31
ERCC4Q92889 RNU6-1192P-201ENST00000612197 107 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms