Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NPM1P9-201ENST00000453156 844 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 RN7SL269P-201ENST00000467795 305 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 RPL12P30-201ENST00000488389 499 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AC022133.1-201ENST00000490961 571 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.83□□□□□ -1.64
AP3S1Q92572 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.83□□□□□ -1.64
AP3S1Q92572 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.83□□□□□ -1.64
AP3S1Q92572 AC022360.1-201ENST00000521058 340 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.83□□□□□ -1.64
AP3S1Q92572 AC130366.1-201ENST00000526505 1192 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.83□□□□□ -1.64
AP3S1Q92572 AC096996.1-201ENST00000563813 325 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
AP3S1Q92572 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.83□□□□□ -1.64
AP3S1Q92572 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.83□□□□□ -1.64
AP3S1Q92572 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.83□□□□□ -1.64
AP3S1Q92572 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AC026333.4-201ENST00000613543 544 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AL512652.1-201ENST00000619006 500 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AL121985.3-201ENST00000620690 523 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AC006840.1-201ENST00000623069 542 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.83□□□□□ -1.64
AP3S1Q92572 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 AC003973.3-201ENST00000624863 2822 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AP3S1Q92572 STX3-208ENST00000641815 3236 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.83□□□□□ -1.64
AP3S1Q92572 PWAR1-201ENST00000624188 2414 ntBASIC4.83□□□□□ -1.64
AP3S1Q92572 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP3S1Q92572 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.82□□□□□ -1.64
AP3S1Q92572 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP3S1Q92572 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 VDAC2P1-201ENST00000399358 958 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC233289.1-201ENST00000403700 508 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AL359643.1-201ENST00000404109 423 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AL357752.1-201ENST00000412817 349 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.82□□□□□ -1.64
AP3S1Q92572 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.82□□□□□ -1.64
AP3S1Q92572 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S1Q92572 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 PRELID1P3-201ENST00000450055 643 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 RPS7P10-201ENST00000464254 603 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC113367.2-201ENST00000505749 160 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC008868.1-201ENST00000509786 737 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 SCARNA20.4-201ENST00000516969 131 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S1Q92572 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.82□□□□□ -1.64
AP3S1Q92572 AC036111.2-201ENST00000533247 901 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 VDAC2P2-201ENST00000544463 901 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 NIFKP4-201ENST00000567275 1192 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.82□□□□□ -1.64
AP3S1Q92572 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 SMIM12P1-201ENST00000603004 274 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.82□□□□□ -1.64
AP3S1Q92572 RPSAP75-201ENST00000605848 301 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 AL136131.3-201ENST00000607600 188 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 AC132825.8-201ENST00000640783 297 ntBASIC4.82□□□□□ -1.64
AP3S1Q92572 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
AP3S1Q92572 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
AP3S1Q92572 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP3S1Q92572 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.81□□□□□ -1.64
AP3S1Q92572 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S1Q92572 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
AP3S1Q92572 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S1Q92572 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S1Q92572 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
AP3S1Q92572 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.81□□□□□ -1.64
AP3S1Q92572 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
AP3S1Q92572 RNA5SP85-201ENST00000365378 119 ntBASIC4.81□□□□□ -1.64
AP3S1Q92572 AC092634.1-201ENST00000366505 199 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms