Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF4Q92544 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF4Q92544 SELENOWP1-201ENST00000322792 252 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 NACAP7-201ENST00000407371 609 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 NMD3P2-201ENST00000421815 761 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 BX323845.3-201ENST00000428215 527 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 LYPLA1P1-201ENST00000434514 622 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 LRRC37A14P-201ENST00000452297 462 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 OSTCP1-201ENST00000455507 450 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 RPS26P24-201ENST00000497656 331 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF4Q92544 ST13P12-201ENST00000508958 1094 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF4Q92544 TOMM22P4-201ENST00000511318 336 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC234775.3-201ENST00000564612 656 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 MIR3176-201ENST00000582210 90 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 MIR4260-201ENST00000583107 67 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 RPL21P136-201ENST00000605378 396 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AL139099.4-201ENST00000614802 114 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 AC104820.1-201ENST00000624183 307 ntBASIC5.5□□□□□ -1.53
TM9SF4Q92544 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF4Q92544 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM9SF4Q92544 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.5□□□□□ -1.53
TM9SF4Q92544 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC092451.3-201ENST00000625067 1343 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 RPL35AP3-201ENST00000414680 288 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC093155.2-201ENST00000420734 937 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 KIF4CP-201ENST00000422742 1279 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 XKRYP6-201ENST00000440468 1116 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 XKRYP3-201ENST00000442113 1116 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AGGF1P3-201ENST00000493675 1213 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 RN7SL466P-201ENST00000497546 295 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC008629.2-201ENST00000503783 483 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC026782.2-201ENST00000510845 636 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC021733.2-201ENST00000518830 497 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 IGKV2-18-201ENST00000522607 343 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 HMGN2P36-201ENST00000529541 409 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC006518.1-201ENST00000541449 943 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC051619.2-201ENST00000559063 397 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC013244.1-201ENST00000604279 193 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 AL589674.2-201ENST00000604304 337 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 SAMM50P1-201ENST00000455403 1399 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AL161756.3-201ENST00000641216 2071 ntBASIC5.49□□□□□ -1.53
TM9SF4Q92544 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TM9SF4Q92544 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM9SF4Q92544 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TM9SF4Q92544 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM9SF4Q92544 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms