Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AL359715.4-201ENST00000606629 1436 ntBASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.29□□□□□ -1.56
LINC00346Q8IVM7 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LYARP1-201ENST00000436977 1501 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AP002512.4-202ENST00000641599 4530 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RN7SKP184-201ENST00000362348 333 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 HMGB1P10-201ENST00000395823 563 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AL034417.1-201ENST00000399343 800 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AL035422.1-201ENST00000414193 397 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RPL12P12-201ENST00000424633 501 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 GAPDHP34-201ENST00000432112 823 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 CYCSP51-201ENST00000443545 318 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 FTLP8-201ENST00000446770 267 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC044810.1-201ENST00000480271 711 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC083795.1-201ENST00000491760 320 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC106822.1-201ENST00000502647 526 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC010468.3-201ENST00000508225 458 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 TOMM22P4-201ENST00000511318 336 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 MAST4-IT1-201ENST00000514241 658 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AP001267.4-201ENST00000602598 545 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC007423.1-201ENST00000605009 627 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC011472.4-201ENST00000615848 491 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC106730.3-201ENST00000624568 641 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 SNX18P12-201ENST00000624821 759 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC073488.6-201ENST00000632293 754 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 THAP12P9-201ENST00000503971 2360 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AP001002.1-201ENST00000625148 1513 ntBASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
LINC00346Q8IVM7 AC005224.3-201ENST00000584683 2140 ntBASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 AC010329.2-201ENST00000595195 2737 ntBASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 RNU6-609P-201ENST00000365459 107 ntBASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.27□□□□□ -1.57
LINC00346Q8IVM7 MIR320B1-201ENST00000390209 79 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms