Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PACS2Q86VP3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PACS2Q86VP3 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PACS2Q86VP3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PACS2Q86VP3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PACS2Q86VP3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.21□□□□□ -1.09
PACS2Q86VP3 OR7E25P-202ENST00000641088 5937 ntBASIC8.21□□□□□ -1.09
PACS2Q86VP3 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
PACS2Q86VP3 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PACS2Q86VP3 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.09
PACS2Q86VP3 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 VEZF1P1-201ENST00000423931 1541 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 OR11H4-201ENST00000315409 1082 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 NACAP2-201ENST00000318548 624 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 Y_RNA.197-201ENST00000364004 102 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 RN7SKP6-201ENST00000364795 319 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 COX17P1-201ENST00000378775 192 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 RNU6-1158P-201ENST00000391167 107 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 OR51A3P-201ENST00000413596 924 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC011998.2-201ENST00000430884 473 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 LSM1P1-201ENST00000438629 273 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 BTF3P5-201ENST00000457252 467 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 MTATP8P1-201ENST00000467115 207 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 NMNAT1P4-201ENST00000505598 840 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 SSX8-201ENST00000506270 579 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 GUSBP3-201ENST00000509348 423 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 PCBP2P3-201ENST00000509726 843 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 BTG4P1-201ENST00000510421 183 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 SNRPGP18-201ENST00000553000 214 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 NMNAT1P1-201ENST00000554095 876 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 AL161670.1-201ENST00000554348 137 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 EIF4EBP1P1-201ENST00000557776 341 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 Z84480.1-201ENST00000605131 311 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC245100.4-207ENST00000640776 1082 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC008498.2-201ENST00000624033 2322 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 AC018765.1-201ENST00000623357 3446 ntBASIC8.21□□□□□ -1.1
PACS2Q86VP3 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.21□□□□□ -1.1
PACS2Q86VP3 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PACS2Q86VP3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 AC055716.2-201ENST00000552545 2441 ntBASIC8.2□□□□□ -1.1
PACS2Q86VP3 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PACS2Q86VP3 AL157831.2-201ENST00000564681 3095 ntBASIC8.2□□□□□ -1.1
PACS2Q86VP3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PACS2Q86VP3 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PACS2Q86VP3 RPL7P26-201ENST00000333817 754 ntBASIC8.2□□□□□ -1.1
PACS2Q86VP3 SUGT1P1-201ENST00000379514 476 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms