Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL031846.1-201ENST00000560933 314 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 FAM30C-201ENST00000561158 410 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC096708.2-201ENST00000577676 512 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC008507.1-201ENST00000587506 734 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 VN1R81P-201ENST00000602085 372 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC027243.2-201ENST00000602530 724 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL512430.4-201ENST00000603085 613 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC015871.2-201ENST00000603605 948 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC020910.2-201ENST00000603635 610 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC063962.1-201ENST00000608199 521 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC055764.2-201ENST00000610089 670 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AL357080.1-201ENST00000617394 239 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC034229.6-201ENST00000623704 224 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 TMEM75-201ENST00000624314 2165 ntBASIC6.42□□□□□ -1.38
ATG4DQ86TL0 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.42□□□□□ -1.38
ATG4DQ86TL0 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 TMSB4XP4-201ENST00000323496 618 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 EIF4A1P1-201ENST00000420241 934 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 MYO5BP3-201ENST00000431872 1279 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 TCEA1P3-201ENST00000443005 880 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 RPS27P5-201ENST00000444247 244 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC073072.2-201ENST00000447425 348 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 RPL36AP33-201ENST00000450395 310 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 RN7SL834P-201ENST00000461450 286 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC135721.2-201ENST00000464237 300 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 KLF3P2-201ENST00000465138 268 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 RN7SL456P-201ENST00000469290 295 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 PGBD4P1-201ENST00000473644 407 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC093824.1-201ENST00000508796 343 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AL049830.4-201ENST00000555149 351 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 IGLJCOR18-201ENST00000584002 424 ntBASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4DQ86TL0 AC012254.4-201ENST00000588843 273 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms