Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNU1-149P-201ENST00000390870 161 ntBASIC5.4□□□□□ -1.55
RIF1Q5UIP0 RNU11-6P-201ENST00000391127 133 ntBASIC5.4□□□□□ -1.55
RIF1Q5UIP0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 AL139415.1-201ENST00000424862 352 ntBASIC5.4□□□□□ -1.55
RIF1Q5UIP0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 EIF3KP3-201ENST00000514461 639 ntBASIC5.4□□□□□ -1.55
RIF1Q5UIP0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RIF1Q5UIP0 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AP003170.5-201ENST00000397185 335 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 PPIAP21-201ENST00000464473 501 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC024940.3-201ENST00000538551 316 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 RMST-210ENST00000640149 2844 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC015864.1-201ENST00000496512 544 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 MIR2117-201ENST00000516780 80 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 IGKV1-32-201ENST00000519290 311 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC138701.1-201ENST00000524329 714 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC091042.1-201ENST00000579213 173 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC022726.2-201ENST00000634673 547 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 AC011369.2-201ENST00000624423 1567 ntBASIC5.39□□□□□ -1.55
RIF1Q5UIP0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RIF1Q5UIP0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 MED28P3-201ENST00000444288 531 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 GTF2F2P1-201ENST00000511083 675 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 TPM3P3-201ENST00000521343 354 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC127381.1-201ENST00000555979 939 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL034374.2-201ENST00000605281 548 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC005962.2-201ENST00000611427 652 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AF131215.2-201ENST00000531549 1710 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC092821.3-202ENST00000641304 2767 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 MFSD8-220ENST00000641243 1422 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AC005225.5-201ENST00000623547 2225 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 AL122126.1-201ENST00000546905 1318 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 RNA5SP388-201ENST00000362584 119 ntBASIC5.38□□□□□ -1.55
RIF1Q5UIP0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms