Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.62□□□□□ -1.51
LAMA3Q16787 MTCO1P1-201ENST00000624263 1081 ntBASIC5.62□□□□□ -1.51
LAMA3Q16787 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LAMA3Q16787 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LAMA3Q16787 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LAMA3Q16787 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LAMA3Q16787 AL022323.3-201ENST00000623888 5388 ntBASIC5.62□□□□□ -1.51
LAMA3Q16787 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LAMA3Q16787 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LAMA3Q16787 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LAMA3Q16787 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
LAMA3Q16787 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 Y_RNA.333-201ENST00000365274 102 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 U3.30-201ENST00000391308 210 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 MRPS21P2-201ENST00000424704 264 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 RSU1P1-201ENST00000453416 441 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 KCTD9P4-201ENST00000526766 1166 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 AC005224.3-201ENST00000584683 2140 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LAMA3Q16787 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.61□□□□□ -1.51
LAMA3Q16787 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.61□□□□□ -1.51
LAMA3Q16787 MIR670-201ENST00000390142 98 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.61□□□□□ -1.51
LAMA3Q16787 TXNP5-201ENST00000441043 315 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 NDUFA5P8-201ENST00000449019 346 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.61□□□□□ -1.51
LAMA3Q16787 AC005341.1-201ENST00000571086 708 ntBASIC5.61□□□□□ -1.51
LAMA3Q16787 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LAMA3Q16787 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LAMA3Q16787 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.6□□□□□ -1.51
LAMA3Q16787 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.6□□□□□ -1.51
LAMA3Q16787 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LAMA3Q16787 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LAMA3Q16787 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.6□□□□□ -1.51
LAMA3Q16787 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC5.6□□□□□ -1.51
LAMA3Q16787 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 GAPDHP56-201ENST00000506031 988 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 SNORA67.7-201ENST00000516664 135 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 MED28P5-201ENST00000528254 438 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 TCL6_3.1-201ENST00000619064 137 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 AC034229.5-201ENST00000624258 185 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 AL353795.3-201ENST00000624351 5702 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 AC108751.5-201ENST00000492880 1336 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.6□□□□□ -1.51
LAMA3Q16787 IGKV7-3-201ENST00000357453 298 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.6□□□□□ -1.51
LAMA3Q16787 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.6□□□□□ -1.51
LAMA3Q16787 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.6□□□□□ -1.51
LAMA3Q16787 AP003789.1-201ENST00000617737 605 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.6□□□□□ -1.51
LAMA3Q16787 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LAMA3Q16787 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC5.6□□□□□ -1.51
LAMA3Q16787 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LAMA3Q16787 AC114774.1-201ENST00000507410 1770 ntBASIC5.6□□□□□ -1.51
LAMA3Q16787 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC5.6□□□□□ -1.51
LAMA3Q16787 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LAMA3Q16787 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.59□□□□□ -1.51
LAMA3Q16787 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.59□□□□□ -1.51
LAMA3Q16787 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LAMA3Q16787 YWHABP2-201ENST00000540201 713 ntBASIC5.59□□□□□ -1.51
LAMA3Q16787 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.59□□□□□ -1.51
LAMA3Q16787 AL049779.3-201ENST00000557141 606 ntBASIC5.59□□□□□ -1.51
LAMA3Q16787 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.59□□□□□ -1.51
LAMA3Q16787 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.59□□□□□ -1.51
LAMA3Q16787 AC027334.1-201ENST00000603257 310 ntBASIC5.59□□□□□ -1.51
LAMA3Q16787 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.59□□□□□ -1.51
LAMA3Q16787 AC116631.1-202ENST00000640984 683 ntBASIC5.59□□□□□ -1.51
LAMA3Q16787 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LAMA3Q16787 OFD1P17-201ENST00000437639 3018 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms