Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC091167.5-201ENST00000605689 894 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AL162574.1-201ENST00000615702 950 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AL136228.1-201ENST00000622221 319 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AP001052.1-201ENST00000626421 99 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 CASC19-274ENST00000642018 970 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AL354854.1-201ENST00000455940 1363 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 QRSL1P1-201ENST00000400977 1540 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 AC011503.2-201ENST00000594230 1500 ntBASIC4.34□□□□□ -1.71
HIST1H1AQ02539 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.34□□□□□ -1.71
HIST1H1AQ02539 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.34□□□□□ -1.72
HIST1H1AQ02539 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
HIST1H1AQ02539 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
HIST1H1AQ02539 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 ABCC13-202ENST00000463099 3842 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 MFSD8-239ENST00000641590 2479 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 CASC19-238ENST00000641523 1558 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC117409.1-201ENST00000470499 1310 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC092681.1-201ENST00000297369 291 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 RNU1-146P-201ENST00000364015 165 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 RPL35AP3-201ENST00000414680 288 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 HYALP1-201ENST00000417674 1279 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC019205.1-201ENST00000421830 730 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 EEF1B2P3-201ENST00000447718 678 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 OR7E116P-201ENST00000448529 957 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 RPS23P9-201ENST00000448848 438 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AL591623.2-201ENST00000449978 222 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC073476.1-201ENST00000452854 407 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AL157777.1-201ENST00000468100 304 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 RN7SL57P-201ENST00000493687 290 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC093890.1-201ENST00000502554 540 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC138409.2-202ENST00000507274 458 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 IGLV3-24-201ENST00000517477 197 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC127381.1-201ENST00000555979 939 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 RPA2P1-201ENST00000556557 721 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC106730.2-201ENST00000566641 540 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC002310.3-201ENST00000569728 723 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC233702.9-201ENST00000581528 203 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC005244.1-201ENST00000582566 339 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 AC074140.1-201ENST00000621617 208 ntBASIC4.33□□□□□ -1.72
HIST1H1AQ02539 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HIST1H1AQ02539 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC090181.3-201ENST00000624777 1514 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 RNU4-44P-201ENST00000363050 141 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 FAM183DP-201ENST00000421987 399 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AC126120.1-201ENST00000431082 470 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 AL354893.1-201ENST00000433735 348 ntBASIC4.32□□□□□ -1.72
HIST1H1AQ02539 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HIST1H1AQ02539 TIMM8BP2-201ENST00000445940 251 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms