Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ICE2P1-201ENST00000512800 1849 ntBASIC5.67□□□□□ -1.5
RAE1P78406 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAE1P78406 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 GNL2P1-201ENST00000451274 2190 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 AC008627.1-201ENST00000517511 1704 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AL359955.1-201ENST00000455242 3275 ntBASIC5.66□□□□□ -1.5
RAE1P78406 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 RNU6-354P-201ENST00000383862 107 ntBASIC5.66□□□□□ -1.5
RAE1P78406 RNU6-468P-201ENST00000384003 109 ntBASIC5.66□□□□□ -1.5
RAE1P78406 RNU6-610P-201ENST00000384264 107 ntBASIC5.66□□□□□ -1.5
RAE1P78406 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAE1P78406 RPL22P22-201ENST00000395439 379 ntBASIC5.66□□□□□ -1.5
RAE1P78406 HMGB3P19-201ENST00000403971 560 ntBASIC5.66□□□□□ -1.5
RAE1P78406 GCNT1P4-201ENST00000404096 329 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AL355615.1-201ENST00000406187 641 ntBASIC5.66□□□□□ -1.5
RAE1P78406 SNRPEP6-201ENST00000407465 277 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.66□□□□□ -1.5
RAE1P78406 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.66□□□□□ -1.5
RAE1P78406 AC021876.1-201ENST00000425959 359 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC099677.3-201ENST00000427081 395 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 AL663074.2-201ENST00000440621 479 ntBASIC5.66□□□□□ -1.5
RAE1P78406 TPTE2P3-201ENST00000441562 1189 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AL445466.1-201ENST00000448432 357 ntBASIC5.66□□□□□ -1.5
RAE1P78406 HMGB1P7-201ENST00000450921 612 ntBASIC5.66□□□□□ -1.5
RAE1P78406 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 OSTCP1-201ENST00000455507 450 ntBASIC5.66□□□□□ -1.5
RAE1P78406 RN7SL254P-201ENST00000460609 284 ntBASIC5.66□□□□□ -1.5
RAE1P78406 RN7SL269P-201ENST00000467795 305 ntBASIC5.66□□□□□ -1.5
RAE1P78406 PFN1P6-201ENST00000476786 399 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC091874.2-201ENST00000505889 720 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC018797.1-201ENST00000510791 255 ntBASIC5.66□□□□□ -1.5
RAE1P78406 Y_RNA.717-201ENST00000517106 92 ntBASIC5.66□□□□□ -1.5
RAE1P78406 RN7SKP35-201ENST00000517210 151 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.66□□□□□ -1.5
RAE1P78406 AC010476.1-201ENST00000519111 851 ntBASIC5.66□□□□□ -1.5
RAE1P78406 IGKV3D-25-201ENST00000519599 235 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC078899.1-201ENST00000521432 1185 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC010376.1-201ENST00000522101 334 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC021451.1-201ENST00000523498 1129 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.66□□□□□ -1.5
RAE1P78406 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.66□□□□□ -1.5
RAE1P78406 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.66□□□□□ -1.5
RAE1P78406 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.66□□□□□ -1.5
RAE1P78406 AC007346.2-201ENST00000564816 892 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 AC138207.8-204ENST00000579588 527 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AP005119.1-201ENST00000580956 292 ntBASIC5.66□□□□□ -1.5
RAE1P78406 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 AC004908.3-201ENST00000610248 625 ntBASIC5.66□□□□□ -1.5
RAE1P78406 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 AC021422.1-201ENST00000621212 473 ntBASIC5.66□□□□□ -1.5
RAE1P78406 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.66□□□□□ -1.5
RAE1P78406 AL590396.4-201ENST00000636779 956 ntBASIC5.66□□□□□ -1.5
RAE1P78406 AC099654.15-201ENST00000639802 509 ntBASIC5.66□□□□□ -1.5
RAE1P78406 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAE1P78406 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 AL354854.1-201ENST00000455940 1363 ntBASIC5.66□□□□□ -1.5
RAE1P78406 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.66□□□□□ -1.5
RAE1P78406 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RAE1P78406 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAE1P78406 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RAE1P78406 AC010132.2-201ENST00000295493 1043 ntBASIC5.65□□□□□ -1.5
RAE1P78406 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAE1P78406 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAE1P78406 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 RNU5E-10P-201ENST00000363506 118 ntBASIC5.65□□□□□ -1.5
RAE1P78406 RN7SKP171-201ENST00000364417 303 ntBASIC5.65□□□□□ -1.5
RAE1P78406 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAE1P78406 RN7SKP86-201ENST00000410454 332 ntBASIC5.65□□□□□ -1.5
RAE1P78406 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.65□□□□□ -1.5
RAE1P78406 CDY17P-201ENST00000414121 1282 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms