Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 AC007786.3-201ENST00000615154 596 ntBASIC4.89□□□□□ -1.63
HIST1H3AP68431 AC025574.2-201ENST00000615621 514 ntBASIC4.89□□□□□ -1.63
HIST1H3AP68431 AP005431.1-201ENST00000618479 319 ntBASIC4.89□□□□□ -1.63
HIST1H3AP68431 AC021766.1-201ENST00000624404 741 ntBASIC4.89□□□□□ -1.63
HIST1H3AP68431 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H3AP68431 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HIST1H3AP68431 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.89□□□□□ -1.63
HIST1H3AP68431 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HIST1H3AP68431 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HIST1H3AP68431 RPS2P45-201ENST00000469997 2057 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 MRE11P1-201ENST00000464884 2127 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC068870.1-201ENST00000563737 2455 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC006484.1-201ENST00000435086 1884 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 MT-RNR2-201ENST00000387347 1559 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC092681.1-201ENST00000297369 291 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 HMGN1P20-201ENST00000411849 300 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 RPS27AP6-201ENST00000427962 448 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 MED28P3-201ENST00000444288 531 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC005297.1-201ENST00000444765 862 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 HMGN1P2-201ENST00000445197 310 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 PSAT1P4-201ENST00000466500 526 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC020937.1-201ENST00000519677 1013 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 AL096712.1-201ENST00000614561 159 ntBASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HIST1H3AP68431 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HIST1H3AP68431 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H3AP68431 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H3AP68431 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H3AP68431 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H3AP68431 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 RN7SKP145-201ENST00000363291 303 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HIST1H3AP68431 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 AC115283.1-201ENST00000427353 400 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 RPL7P56-201ENST00000429441 717 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 AC091912.1-201ENST00000511351 248 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 AC138832.1-201ENST00000522871 556 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 AC079064.1-201ENST00000528365 362 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 TRIM51DP-201ENST00000529746 596 ntBASIC4.87□□□□□ -1.63
HIST1H3AP68431 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.87□□□□□ -1.63
HIST1H3AP68431 AC079600.1-201ENST00000550326 297 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms