Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.16□□□□□ -1.42
TPM4P67936 AC092266.1-201ENST00000610958 165 ntBASIC6.16□□□□□ -1.42
TPM4P67936 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.16□□□□□ -1.42
TPM4P67936 BNIP3P41-202ENST00000616656 861 ntBASIC6.16□□□□□ -1.42
TPM4P67936 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.16□□□□□ -1.42
TPM4P67936 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.16□□□□□ -1.42
TPM4P67936 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
TPM4P67936 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TPM4P67936 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.16□□□□□ -1.42
TPM4P67936 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TPM4P67936 AC073136.1-201ENST00000449426 2884 ntBASIC6.16□□□□□ -1.42
TPM4P67936 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TPM4P67936 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
TPM4P67936 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
TPM4P67936 AF287957.1-201ENST00000607368 1595 ntBASIC6.15□□□□□ -1.42
TPM4P67936 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.15□□□□□ -1.42
TPM4P67936 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TPM4P67936 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TPM4P67936 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 MIR130B-202ENST00000385018 82 ntBASIC6.15□□□□□ -1.42
TPM4P67936 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 AL356121.1-201ENST00000442911 156 ntBASIC6.15□□□□□ -1.42
TPM4P67936 AC005165.2-201ENST00000466070 380 ntBASIC6.15□□□□□ -1.42
TPM4P67936 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM4P67936 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM4P67936 HMGN1P9-201ENST00000515212 298 ntBASIC6.15□□□□□ -1.42
TPM4P67936 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM4P67936 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.15□□□□□ -1.42
TPM4P67936 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.15□□□□□ -1.42
TPM4P67936 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.15□□□□□ -1.42
TPM4P67936 AL356801.1-201ENST00000559320 294 ntBASIC6.15□□□□□ -1.42
TPM4P67936 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.15□□□□□ -1.42
TPM4P67936 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.15□□□□□ -1.42
TPM4P67936 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.15□□□□□ -1.42
TPM4P67936 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TPM4P67936 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
TPM4P67936 AC022417.1-201ENST00000624768 1303 ntBASIC6.15□□□□□ -1.43
TPM4P67936 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TPM4P67936 THAP12P5-201ENST00000405864 2275 ntBASIC6.15□□□□□ -1.43
TPM4P67936 AL354854.1-201ENST00000455940 1363 ntBASIC6.15□□□□□ -1.43
TPM4P67936 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TPM4P67936 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
TPM4P67936 Z83820.1-201ENST00000456978 1499 ntBASIC6.15□□□□□ -1.43
TPM4P67936 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
TPM4P67936 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM4P67936 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TPM4P67936 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM4P67936 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 AC097063.1-201ENST00000426714 1797 ntBASIC6.14□□□□□ -1.43
TPM4P67936 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TPM4P67936 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 RBBP4P5-201ENST00000398583 1266 ntBASIC6.14□□□□□ -1.43
TPM4P67936 CTSL3P-202ENST00000412179 788 ntBASIC6.14□□□□□ -1.43
TPM4P67936 NPM1P40-201ENST00000412758 733 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM4P67936 RPSAP35-201ENST00000413753 818 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM4P67936 BX284632.2-201ENST00000421091 399 ntBASIC6.14□□□□□ -1.43
TPM4P67936 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM4P67936 HSPD1P12-201ENST00000429127 1069 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AC090018.1-201ENST00000434369 367 ntBASIC6.14□□□□□ -1.43
TPM4P67936 ATP5LP2-201ENST00000440646 311 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AL512605.1-202ENST00000441919 381 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AL359955.2-201ENST00000445380 353 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AC012512.1-201ENST00000446594 718 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AC009120.1-201ENST00000493458 473 ntBASIC6.14□□□□□ -1.43
TPM4P67936 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.14□□□□□ -1.43
TPM4P67936 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TPM4P67936 AC007956.1-201ENST00000555623 542 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM4P67936 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM4P67936 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.14□□□□□ -1.43
TPM4P67936 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM4P67936 AC108738.1-201ENST00000603703 237 ntBASIC6.14□□□□□ -1.43
TPM4P67936 AC108673.3-201ENST00000609183 335 ntBASIC6.14□□□□□ -1.43
TPM4P67936 uc_338.31-201ENST00000615595 186 ntBASIC6.14□□□□□ -1.43
TPM4P67936 MIR6823-201ENST00000622118 61 ntBASIC6.14□□□□□ -1.43
TPM4P67936 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
TPM4P67936 SAMMSON-227ENST00000642114 1199 ntBASIC6.14□□□□□ -1.43
TPM4P67936 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.14□□□□□ -1.43
TPM4P67936 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TPM4P67936 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.13□□□□□ -1.43
TPM4P67936 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TPM4P67936 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TPM4P67936 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 AC093849.1-201ENST00000563631 2209 ntBASIC6.13□□□□□ -1.43
TPM4P67936 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TPM4P67936 RNFT1P3-201ENST00000340898 1052 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms