Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC068491.1-201ENST00000449539 1241 ntBASIC3.79□□□□□ -1.8
RPL39P62891 CST12P-201ENST00000457644 362 ntBASIC3.79□□□□□ -1.8
RPL39P62891 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC3.79□□□□□ -1.8
RPL39P62891 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 RPL15P21-201ENST00000495592 567 ntBASIC3.79□□□□□ -1.8
RPL39P62891 AC109464.1-201ENST00000511091 819 ntBASIC3.79□□□□□ -1.8
RPL39P62891 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 RNA5SP340-201ENST00000517132 107 ntBASIC3.79□□□□□ -1.8
RPL39P62891 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 LDHC-203ENST00000535809 757 ntTSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC3.79□□□□□ -1.8
RPL39P62891 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 AC022884.2-201ENST00000578535 580 ntBASIC3.79□□□□□ -1.8
RPL39P62891 RN7SL230P-201ENST00000580835 303 ntBASIC3.79□□□□□ -1.8
RPL39P62891 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
RPL39P62891 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.79□□□□□ -1.8
RPL39P62891 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 uc_338.31-201ENST00000615595 186 ntBASIC3.79□□□□□ -1.8
RPL39P62891 AL390318.1-201ENST00000624564 687 ntBASIC3.79□□□□□ -1.8
RPL39P62891 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 CASC19-238ENST00000641523 1558 ntBASIC3.79□□□□□ -1.8
RPL39P62891 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 AC008079.2-201ENST00000623543 20396 ntBASIC3.79□□□□□ -1.8
RPL39P62891 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 MRE11P1-201ENST00000464884 2127 ntBASIC3.79□□□□□ -1.8
RPL39P62891 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.78□□□□□ -1.8
RPL39P62891 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.78□□□□□ -1.8
RPL39P62891 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 AC017079.1-201ENST00000333650 415 ntBASIC3.78□□□□□ -1.8
RPL39P62891 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 SNORA64.1-201ENST00000362600 132 ntBASIC3.78□□□□□ -1.8
RPL39P62891 NPM1P40-201ENST00000412758 733 ntBASIC3.78□□□□□ -1.8
RPL39P62891 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.78□□□□□ -1.8
RPL39P62891 VN1R110P-201ENST00000438988 971 ntBASIC3.78□□□□□ -1.8
RPL39P62891 RPL12P49-201ENST00000441100 121 ntBASIC3.78□□□□□ -1.8
RPL39P62891 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.78□□□□□ -1.8
RPL39P62891 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC3.78□□□□□ -1.8
RPL39P62891 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 RPS17P15-201ENST00000475609 349 ntBASIC3.78□□□□□ -1.8
RPL39P62891 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 RPL29P23-201ENST00000486188 442 ntBASIC3.78□□□□□ -1.8
RPL39P62891 AC106822.1-201ENST00000502647 526 ntBASIC3.78□□□□□ -1.8
RPL39P62891 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.78□□□□□ -1.8
RPL39P62891 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.78□□□□□ -1.8
RPL39P62891 AP006245.2-201ENST00000522004 300 ntBASIC3.78□□□□□ -1.8
RPL39P62891 MINCR-206ENST00000524335 499 ntTSL 2 BASIC3.78□□□□□ -1.8
RPL39P62891 ARL6IP1P3-201ENST00000524544 560 ntBASIC3.78□□□□□ -1.8
RPL39P62891 AC007956.1-201ENST00000555623 542 ntBASIC3.78□□□□□ -1.8
RPL39P62891 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC3.78□□□□□ -1.8
RPL39P62891 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC3.78□□□□□ -1.8
RPL39P62891 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 AC009027.1-201ENST00000604510 479 ntBASIC3.78□□□□□ -1.8
RPL39P62891 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC3.78□□□□□ -1.8
RPL39P62891 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 Xist_exon4.1-201ENST00000615964 126 ntBASIC3.78□□□□□ -1.8
RPL39P62891 Six3os1_2.1-201ENST00000616963 217 ntBASIC3.78□□□□□ -1.8
RPL39P62891 MIR6721-201ENST00000617181 87 ntBASIC3.78□□□□□ -1.8
RPL39P62891 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC3.78□□□□□ -1.8
RPL39P62891 MIR6839-201ENST00000620425 113 ntBASIC3.78□□□□□ -1.8
RPL39P62891 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC3.78□□□□□ -1.8
RPL39P62891 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC3.78□□□□□ -1.8
RPL39P62891 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPL39P62891 AC093225.1-201ENST00000506867 1408 ntBASIC3.78□□□□□ -1.8
RPL39P62891 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RPL39P62891 AC025574.1-201ENST00000554784 1653 ntBASIC3.78□□□□□ -1.81
RPL39P62891 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RPL39P62891 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.78□□□□□ -1.81
RPL39P62891 AC023632.6-201ENST00000624338 2177 ntBASIC3.78□□□□□ -1.81
RPL39P62891 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RPL39P62891 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPL39P62891 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPL39P62891 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RPL39P62891 AL672167.1-204ENST00000641875 3017 ntBASIC3.77□□□□□ -1.81
RPL39P62891 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RPL39P62891 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPL39P62891 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPL39P62891 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPL39P62891 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RPL39P62891 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPL39P62891 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms