Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
LMO4P61968 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 LINC01963-201ENST00000562038 3148 ntBASIC4.7□□□□□ -1.66
LMO4P61968 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 AL161756.3-201ENST00000641216 2071 ntBASIC4.7□□□□□ -1.66
LMO4P61968 MAPK10-261ENST00000641050 3109 ntBASIC4.7□□□□□ -1.66
LMO4P61968 Y_RNA.62-201ENST00000362840 99 ntBASIC4.7□□□□□ -1.66
LMO4P61968 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.7□□□□□ -1.66
LMO4P61968 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 MIR130A-201ENST00000385274 89 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC007068.1-201ENST00000396690 844 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AL136116.2-201ENST00000404020 785 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.7□□□□□ -1.66
LMO4P61968 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.7□□□□□ -1.66
LMO4P61968 AC073310.1-201ENST00000423226 1033 ntBASIC4.7□□□□□ -1.66
LMO4P61968 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 BRWD1P3-201ENST00000428816 390 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC019185.1-201ENST00000442718 389 ntBASIC4.7□□□□□ -1.66
LMO4P61968 GXYLT1P1-201ENST00000446657 490 ntBASIC4.7□□□□□ -1.66
LMO4P61968 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.7□□□□□ -1.66
LMO4P61968 MTCYBP14-201ENST00000457471 715 ntBASIC4.7□□□□□ -1.66
LMO4P61968 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.7□□□□□ -1.66
LMO4P61968 RN7SL583P-201ENST00000475692 287 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC079080.1-201ENST00000479841 822 ntBASIC4.7□□□□□ -1.66
LMO4P61968 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.7□□□□□ -1.66
LMO4P61968 RNA5SP34-201ENST00000516887 130 ntBASIC4.7□□□□□ -1.66
LMO4P61968 IGLV2-28-201ENST00000520681 304 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC078899.1-201ENST00000521432 1185 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 AC016180.1-201ENST00000567945 403 ntBASIC4.7□□□□□ -1.66
LMO4P61968 FKBP1AP1-201ENST00000594588 318 ntBASIC4.7□□□□□ -1.66
LMO4P61968 IMMP1LP3-201ENST00000604197 224 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC017076.1-201ENST00000607613 578 ntBASIC4.7□□□□□ -1.66
LMO4P61968 SDR42E1P1-201ENST00000611327 477 ntBASIC4.7□□□□□ -1.66
LMO4P61968 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 MIR8080-201ENST00000622224 89 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC243960.7-201ENST00000623532 707 ntBASIC4.7□□□□□ -1.66
LMO4P61968 AC132068.1-201ENST00000623805 459 ntBASIC4.7□□□□□ -1.66
LMO4P61968 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LMO4P61968 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.7□□□□□ -1.66
LMO4P61968 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LMO4P61968 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 AC093909.5-201ENST00000621839 1799 ntBASIC4.7□□□□□ -1.66
LMO4P61968 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 AC005725.1-201ENST00000577346 2607 ntBASIC4.7□□□□□ -1.66
LMO4P61968 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LMO4P61968 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMO4P61968 MAPK10-270ENST00000641102 3538 ntBASIC4.69□□□□□ -1.66
LMO4P61968 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMO4P61968 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
LMO4P61968 AC107980.1-201ENST00000558671 3355 ntBASIC4.69□□□□□ -1.66
LMO4P61968 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LMO4P61968 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LMO4P61968 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LMO4P61968 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 RNA5SP319-201ENST00000362768 119 ntBASIC4.69□□□□□ -1.66
LMO4P61968 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 AC009804.1-201ENST00000400949 179 ntBASIC4.69□□□□□ -1.66
LMO4P61968 GABARAPL3-201ENST00000412799 354 ntBASIC4.69□□□□□ -1.66
LMO4P61968 RPL12P43-201ENST00000420608 499 ntBASIC4.69□□□□□ -1.66
LMO4P61968 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.69□□□□□ -1.66
LMO4P61968 AL356806.1-201ENST00000422524 916 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.69□□□□□ -1.66
LMO4P61968 AC006335.2-201ENST00000437993 330 ntBASIC4.69□□□□□ -1.66
LMO4P61968 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.69□□□□□ -1.66
LMO4P61968 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LMO4P61968 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms