Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC145207.9-201ENST00000623802 325 ntBASIC6.23□□□□□ -1.41
GFRA1P56159 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.23□□□□□ -1.41
GFRA1P56159 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
GFRA1P56159 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
GFRA1P56159 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.23□□□□□ -1.41
GFRA1P56159 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 AL589993.1-201ENST00000407450 2524 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
GFRA1P56159 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GFRA1P56159 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 PPIAP26-201ENST00000377951 522 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 Y_RNA.553-201ENST00000384670 102 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GFRA1P56159 CEACAMP8-201ENST00000413902 580 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 AL022324.2-201ENST00000434827 780 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 AP000936.2-201ENST00000447151 681 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 RN7SL790P-201ENST00000474043 298 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 TRBV8-2-201ENST00000475637 270 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 RNA5SP318-201ENST00000516352 92 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AP005902.2-201ENST00000518393 307 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC131935.1-201ENST00000524621 333 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 AP000619.2-201ENST00000546014 969 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 RPL3P13-201ENST00000550415 216 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.22□□□□□ -1.41
GFRA1P56159 AGGF1P7-201ENST00000562369 913 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC006362.1-201ENST00000567392 174 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.22□□□□□ -1.41
GFRA1P56159 MIR378C-201ENST00000578683 81 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 OR4K7P-201ENST00000580232 945 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC011453.2-201ENST00000603737 729 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 AC008083.4-201ENST00000615076 444 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 OR8G7P-201ENST00000616658 848 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.22□□□□□ -1.41
GFRA1P56159 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC127502.3-201ENST00000636170 1206 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC099654.15-201ENST00000639802 509 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC003973.3-201ENST00000624863 2822 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 AC241584.2-201ENST00000637142 2090 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 AC104837.1-201ENST00000444644 1587 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 AC005614.1-201ENST00000598952 3653 ntBASIC6.22□□□□□ -1.41
GFRA1P56159 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
GFRA1P56159 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.22□□□□□ -1.41
GFRA1P56159 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GFRA1P56159 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms