Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.76□□□□□ -1.49
SUMO3P55854 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.76□□□□□ -1.49
SUMO3P55854 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.76□□□□□ -1.49
SUMO3P55854 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SUMO3P55854 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 BIN2P1-201ENST00000504996 1530 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 MTCO1P15-201ENST00000529569 1526 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 VPS35P1-201ENST00000563400 1518 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 AL589993.1-201ENST00000407450 2524 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 CASC19-246ENST00000641625 1606 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SUMO3P55854 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 MIR320B1-201ENST00000390209 79 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 PSMA6P1-201ENST00000400275 741 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 AC092638.1-201ENST00000411966 1275 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 TCEA1P4-201ENST00000415066 844 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC007568.1-201ENST00000422912 471 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 XKRYP1-201ENST00000423438 492 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 OSTCP4-201ENST00000424397 449 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 XKRYP2-201ENST00000432915 492 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 AL590399.4-201ENST00000436561 601 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 VN1R25P-201ENST00000443385 738 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 AL022237.1-201ENST00000446663 358 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 MRPL35P2-201ENST00000448009 511 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 AL451063.1-201ENST00000450164 1133 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 KF459542.1-201ENST00000450908 553 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.75□□□□□ -1.49
SUMO3P55854 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC113420.1-201ENST00000507903 571 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 NDUFS5P6-201ENST00000529136 295 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 RPA2P3-201ENST00000533268 770 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC008083.2-201ENST00000546707 476 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC027104.1-201ENST00000563702 681 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC005332.4-201ENST00000592752 579 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC063977.7-201ENST00000594454 337 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC005377.1-201ENST00000605126 456 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.75□□□□□ -1.49
SUMO3P55854 AC015819.1-201ENST00000613588 663 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC099654.15-201ENST00000639802 509 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 AC010325.3-201ENST00000641084 394 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 CR788268.1-201ENST00000603931 1809 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SUMO3P55854 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 MSL3P1-202ENST00000440028 1468 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SUMO3P55854 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.75□□□□□ -1.49
SUMO3P55854 CCT8P1-201ENST00000413611 1657 ntBASIC5.75□□□□□ -1.49
SUMO3P55854 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SUMO3P55854 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SUMO3P55854 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SUMO3P55854 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SUMO3P55854 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SUMO3P55854 AC092692.1-201ENST00000623625 2595 ntBASIC5.74□□□□□ -1.49
SUMO3P55854 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SUMO3P55854 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms