Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGCS2P54868 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGCS2P54868 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGCS2P54868 MTND6P2-201ENST00000512226 524 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 snoU109.5-201ENST00000516231 132 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 CDH12P4-201ENST00000517835 295 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 CDH12P3-201ENST00000517935 295 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 CDH12P1-201ENST00000518435 295 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 OR5D15P-201ENST00000531671 942 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.37□□□□□ -1.39
HMGCS2P54868 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGCS2P54868 AL049539.1-201ENST00000611964 459 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 LINC01739-205ENST00000641890 573 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.37□□□□□ -1.39
HMGCS2P54868 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGCS2P54868 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGCS2P54868 ABCA11P-202ENST00000504019 2110 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGCS2P54868 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HMGCS2P54868 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
HMGCS2P54868 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 OR55B1P-203ENST00000641518 2602 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HMGCS2P54868 RN7SKP115-201ENST00000363177 317 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 U3.36-201ENST00000408418 213 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 RPSAP35-201ENST00000413753 818 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 TMEM183AP1-205ENST00000432739 290 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 NANOGP9-201ENST00000439890 892 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 RSU1P1-201ENST00000453416 441 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 AC109462.1-201ENST00000491087 368 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGCS2P54868 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 HMGB1P44-201ENST00000508597 572 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 RN7SKP66-201ENST00000516681 231 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGCS2P54868 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGCS2P54868 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGCS2P54868 AP002799.1-201ENST00000623552 423 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 AP001784.1-201ENST00000624107 428 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 AC074101.1-201ENST00000637861 241 ntBASIC6.36□□□□□ -1.39
HMGCS2P54868 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGCS2P54868 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HMGCS2P54868 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGCS2P54868 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGCS2P54868 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGCS2P54868 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HMGCS2P54868 HSPA8P18-201ENST00000439846 1928 ntBASIC6.35□□□□□ -1.39
HMGCS2P54868 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGCS2P54868 RPS26P13-201ENST00000419030 330 ntBASIC6.35□□□□□ -1.39
HMGCS2P54868 HSPE1P27-201ENST00000430808 296 ntBASIC6.35□□□□□ -1.39
HMGCS2P54868 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGCS2P54868 RPL7P6-201ENST00000480903 738 ntBASIC6.35□□□□□ -1.39
HMGCS2P54868 RN7SKP253-201ENST00000516424 309 ntBASIC6.35□□□□□ -1.39
HMGCS2P54868 AP000676.2-201ENST00000529711 301 ntBASIC6.35□□□□□ -1.39
HMGCS2P54868 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGCS2P54868 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
HMGCS2P54868 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGCS2P54868 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
HMGCS2P54868 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGCS2P54868 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGCS2P54868 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGCS2P54868 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGCS2P54868 AC093162.1-201ENST00000419682 124 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 AC093655.2-201ENST00000425735 631 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 PA2G4P6-201ENST00000438325 1197 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGCS2P54868 Z80107.2-201ENST00000445127 392 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGCS2P54868 RPL12P39-201ENST00000455456 496 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.34□□□□□ -1.39
HMGCS2P54868 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGCS2P54868 SNORA26.10-201ENST00000516427 141 ntBASIC6.34□□□□□ -1.39
HMGCS2P54868 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGCS2P54868 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.34□□□□□ -1.39
HMGCS2P54868 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms