Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.69□□□□□ -1.34
NUP98P52948 RN7SKP147-201ENST00000517154 244 ntBASIC6.69□□□□□ -1.34
NUP98P52948 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.69□□□□□ -1.34
NUP98P52948 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.69□□□□□ -1.34
NUP98P52948 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.69□□□□□ -1.34
NUP98P52948 MIR4691-201ENST00000583764 85 ntBASIC6.69□□□□□ -1.34
NUP98P52948 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 CASC19-281ENST00000642118 1554 ntBASIC6.69□□□□□ -1.34
NUP98P52948 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NUP98P52948 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.69□□□□□ -1.34
NUP98P52948 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.69□□□□□ -1.34
NUP98P52948 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NUP98P52948 AL033543.1-201ENST00000623440 13454 ntBASIC6.69□□□□□ -1.34
NUP98P52948 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.69□□□□□ -1.34
NUP98P52948 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.69□□□□□ -1.34
NUP98P52948 AC093655.2-201ENST00000425735 631 ntBASIC6.69□□□□□ -1.34
NUP98P52948 RPL7P56-201ENST00000429441 717 ntBASIC6.69□□□□□ -1.34
NUP98P52948 AC105233.1-201ENST00000498840 781 ntBASIC6.69□□□□□ -1.34
NUP98P52948 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NUP98P52948 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.69□□□□□ -1.34
NUP98P52948 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 FAM25E-202ENST00000608562 189 ntBASIC6.69□□□□□ -1.34
NUP98P52948 MIR7703-201ENST00000620784 77 ntBASIC6.69□□□□□ -1.34
NUP98P52948 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUP98P52948 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
NUP98P52948 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.68□□□□□ -1.34
NUP98P52948 AC144833.1-201ENST00000567953 4089 ntBASIC6.68□□□□□ -1.34
NUP98P52948 CASC19-243ENST00000641588 1546 ntBASIC6.68□□□□□ -1.34
NUP98P52948 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.68□□□□□ -1.34
NUP98P52948 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
NUP98P52948 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.68□□□□□ -1.34
NUP98P52948 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.68□□□□□ -1.34
NUP98P52948 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 RNVU1-6-201ENST00000364688 164 ntBASIC6.68□□□□□ -1.34
NUP98P52948 SNORA70.9-201ENST00000384370 135 ntBASIC6.68□□□□□ -1.34
NUP98P52948 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NUP98P52948 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.68□□□□□ -1.34
NUP98P52948 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.68□□□□□ -1.34
NUP98P52948 AL360081.1-201ENST00000428299 555 ntBASIC6.68□□□□□ -1.34
NUP98P52948 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.68□□□□□ -1.34
NUP98P52948 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.68□□□□□ -1.34
NUP98P52948 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.68□□□□□ -1.34
NUP98P52948 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.68□□□□□ -1.34
NUP98P52948 AC011447.4-201ENST00000587562 111 ntBASIC6.68□□□□□ -1.34
NUP98P52948 AC108738.1-201ENST00000603703 237 ntBASIC6.68□□□□□ -1.34
NUP98P52948 AC005252.1-201ENST00000604518 1063 ntBASIC6.68□□□□□ -1.34
NUP98P52948 AC015712.7-201ENST00000615211 635 ntBASIC6.68□□□□□ -1.34
NUP98P52948 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.68□□□□□ -1.34
NUP98P52948 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.68□□□□□ -1.34
NUP98P52948 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NUP98P52948 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.68□□□□□ -1.34
NUP98P52948 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUP98P52948 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NUP98P52948 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.68□□□□□ -1.34
NUP98P52948 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP98P52948 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP98P52948 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.67□□□□□ -1.34
NUP98P52948 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 NXF4-202ENST00000416098 1465 ntBASIC6.67□□□□□ -1.34
NUP98P52948 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NUP98P52948 AC079097.1-201ENST00000512187 1399 ntBASIC6.67□□□□□ -1.34
NUP98P52948 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 GNG5P2-201ENST00000372054 207 ntBASIC6.67□□□□□ -1.34
NUP98P52948 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP98P52948 REG1CP-206ENST00000447469 496 ntBASIC6.67□□□□□ -1.34
NUP98P52948 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP98P52948 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP98P52948 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.67□□□□□ -1.34
NUP98P52948 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.67□□□□□ -1.34
NUP98P52948 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.67□□□□□ -1.34
NUP98P52948 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
NUP98P52948 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
NUP98P52948 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUP98P52948 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms