Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SRRM1P3-201ENST00000426911 2678 ntBASIC5.6□□□□□ -1.51
PDX1P52945 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.6□□□□□ -1.51
PDX1P52945 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 U3.7-201ENST00000363668 216 ntBASIC5.59□□□□□ -1.51
PDX1P52945 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.59□□□□□ -1.51
PDX1P52945 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PDX1P52945 RN7SKP59-201ENST00000410520 314 ntBASIC5.59□□□□□ -1.51
PDX1P52945 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.59□□□□□ -1.51
PDX1P52945 AL357752.1-201ENST00000412817 349 ntBASIC5.59□□□□□ -1.51
PDX1P52945 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.59□□□□□ -1.51
PDX1P52945 AC005297.1-201ENST00000444765 862 ntBASIC5.59□□□□□ -1.51
PDX1P52945 OR6C72P-201ENST00000451403 892 ntBASIC5.59□□□□□ -1.51
PDX1P52945 OR52Y1P-201ENST00000452418 828 ntBASIC5.59□□□□□ -1.51
PDX1P52945 MTND3P4-201ENST00000453537 303 ntBASIC5.59□□□□□ -1.51
PDX1P52945 FRG2FP-204ENST00000453982 852 ntBASIC5.59□□□□□ -1.51
PDX1P52945 ACA64.4-201ENST00000459070 127 ntBASIC5.59□□□□□ -1.51
PDX1P52945 RPL35AP19-201ENST00000469425 329 ntBASIC5.59□□□□□ -1.51
PDX1P52945 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 RNU6-943P-201ENST00000516960 98 ntBASIC5.59□□□□□ -1.51
PDX1P52945 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.59□□□□□ -1.51
PDX1P52945 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.59□□□□□ -1.51
PDX1P52945 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.59□□□□□ -1.51
PDX1P52945 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.59□□□□□ -1.51
PDX1P52945 AC025423.2-201ENST00000537570 439 ntBASIC5.59□□□□□ -1.51
PDX1P52945 MTND2P17-201ENST00000550281 688 ntBASIC5.59□□□□□ -1.51
PDX1P52945 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.59□□□□□ -1.51
PDX1P52945 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
PDX1P52945 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.59□□□□□ -1.51
PDX1P52945 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.59□□□□□ -1.51
PDX1P52945 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 AC005229.3-201ENST00000603438 323 ntBASIC5.59□□□□□ -1.51
PDX1P52945 AC008115.3-201ENST00000614874 549 ntBASIC5.59□□□□□ -1.51
PDX1P52945 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.59□□□□□ -1.51
PDX1P52945 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PDX1P52945 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDX1P52945 AL049634.1-201ENST00000453770 1720 ntBASIC5.59□□□□□ -1.51
PDX1P52945 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.59□□□□□ -1.52
PDX1P52945 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.59□□□□□ -1.52
PDX1P52945 YES1P1-201ENST00000418510 1628 ntBASIC5.59□□□□□ -1.52
PDX1P52945 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PDX1P52945 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 C4BPAP1-201ENST00000415474 1893 ntBASIC5.58□□□□□ -1.52
PDX1P52945 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.58□□□□□ -1.52
PDX1P52945 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.58□□□□□ -1.52
PDX1P52945 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDX1P52945 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDX1P52945 SNORD1C-201ENST00000363315 78 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.58□□□□□ -1.52
PDX1P52945 SPTLC1P2-201ENST00000407089 121 ntBASIC5.58□□□□□ -1.52
PDX1P52945 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.58□□□□□ -1.52
PDX1P52945 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 FAM204CP-201ENST00000424489 642 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AC092651.1-201ENST00000426110 312 ntBASIC5.58□□□□□ -1.52
PDX1P52945 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.58□□□□□ -1.52
PDX1P52945 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.58□□□□□ -1.52
PDX1P52945 RPS3AP38-201ENST00000435889 763 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.58□□□□□ -1.52
PDX1P52945 CUBNP2-201ENST00000443534 1139 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AC073072.2-201ENST00000447425 348 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.58□□□□□ -1.52
PDX1P52945 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 OR52A4P-202ENST00000481634 799 ntBASIC5.58□□□□□ -1.52
PDX1P52945 RPL32P9-201ENST00000487963 407 ntBASIC5.58□□□□□ -1.52
PDX1P52945 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.58□□□□□ -1.52
PDX1P52945 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.58□□□□□ -1.52
PDX1P52945 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.58□□□□□ -1.52
PDX1P52945 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDX1P52945 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.58□□□□□ -1.52
PDX1P52945 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.58□□□□□ -1.52
PDX1P52945 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 AL118508.4-201ENST00000624142 1176 ntBASIC5.58□□□□□ -1.52
PDX1P52945 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.58□□□□□ -1.52
PDX1P52945 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms