Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CLCNKAP51800 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
CLCNKAP51800 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCNKAP51800 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.73□□□□□ -1.49
CLCNKAP51800 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCNKAP51800 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CLCNKAP51800 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLCNKAP51800 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCNKAP51800 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCNKAP51800 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLCNKAP51800 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLCNKAP51800 RNU6-386P-201ENST00000362650 107 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 RNA5SP122-201ENST00000384457 108 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CLCNKAP51800 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 RNU6-564P-201ENST00000410983 104 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AL445213.1-201ENST00000412589 747 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.72□□□□□ -1.49
CLCNKAP51800 MTND4LP21-201ENST00000415303 295 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AL022331.1-201ENST00000429025 477 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AC096775.1-201ENST00000437724 448 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AL390879.1-201ENST00000439143 386 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AL157777.1-201ENST00000468100 304 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 UBFD1P1-201ENST00000473259 814 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 DEFB109A-201ENST00000482450 265 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 MTATP6P1-201ENST00000514057 681 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 SNORA70.17-201ENST00000516449 133 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 TMEM97P2-201ENST00000517841 403 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AC025423.2-201ENST00000537570 439 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AC006518.1-201ENST00000541449 943 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AL121594.2-201ENST00000541658 472 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCNKAP51800 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 OR8G7P-201ENST00000616658 848 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 AC103703.1-201ENST00000634783 663 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 KARSP1-201ENST00000451871 1752 ntBASIC5.72□□□□□ -1.49
CLCNKAP51800 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCNKAP51800 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCNKAP51800 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CLCNKAP51800 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CLCNKAP51800 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CLCNKAP51800 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCNKAP51800 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLCNKAP51800 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLCNKAP51800 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCNKAP51800 AP005432.1-201ENST00000580891 3485 ntBASIC5.71□□□□□ -1.49
CLCNKAP51800 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCNKAP51800 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCNKAP51800 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 AL034546.1-201ENST00000623740 3693 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 Y_RNA.62-201ENST00000362840 99 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCNKAP51800 RPL23AP17-201ENST00000401064 499 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 NPM1P37-201ENST00000403105 874 ntBASIC5.71□□□□□ -1.5
CLCNKAP51800 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms