Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC123769.1-201ENST00000530992 3192 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
BRCC3P46736 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
BRCC3P46736 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BRCC3P46736 RN7SKP6-201ENST00000364795 319 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 MIR551A-201ENST00000385042 96 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 AC005042.1-201ENST00000393397 800 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.94□□□□□ -1.46
BRCC3P46736 BRWD1P3-201ENST00000428816 390 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC026348.1-201ENST00000462549 1053 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 AC024558.1-201ENST00000505008 528 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
BRCC3P46736 PGAM1P13-201ENST00000507497 754 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.94□□□□□ -1.46
BRCC3P46736 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.94□□□□□ -1.46
BRCC3P46736 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.94□□□□□ -1.46
BRCC3P46736 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BRCC3P46736 AC016252.1-201ENST00000609721 474 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.94□□□□□ -1.46
BRCC3P46736 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.94□□□□□ -1.46
BRCC3P46736 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.94□□□□□ -1.46
BRCC3P46736 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BRCC3P46736 AC137056.2-201ENST00000624055 1958 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BRCC3P46736 AC109780.1-201ENST00000451768 1344 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 LINC01963-201ENST00000562038 3148 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BRCC3P46736 AL590763.1-201ENST00000398297 1545 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 AC144833.1-201ENST00000567953 4089 ntBASIC5.94□□□□□ -1.46
BRCC3P46736 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.93□□□□□ -1.46
BRCC3P46736 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.93□□□□□ -1.46
BRCC3P46736 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
BRCC3P46736 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
BRCC3P46736 RNU1-59P-201ENST00000364829 162 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 GNG5P2-201ENST00000372054 207 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRCC3P46736 AL121977.1-201ENST00000401636 979 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 AC092651.1-201ENST00000426110 312 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 RPEP1-201ENST00000504507 658 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.93□□□□□ -1.46
BRCC3P46736 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
BRCC3P46736 AC137627.1-201ENST00000545761 289 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.93□□□□□ -1.46
BRCC3P46736 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.93□□□□□ -1.46
BRCC3P46736 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.93□□□□□ -1.46
BRCC3P46736 NANOGP3-201ENST00000605855 286 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 U1.25-201ENST00000614085 162 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 U1.34-201ENST00000618578 162 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 AC008115.4-201ENST00000619780 775 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 U1.31-201ENST00000620022 160 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 MIR6837-201ENST00000620884 64 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.93□□□□□ -1.46
BRCC3P46736 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.93□□□□□ -1.46
BRCC3P46736 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
BRCC3P46736 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.93□□□□□ -1.46
BRCC3P46736 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
BRCC3P46736 MT-RNR2-201ENST00000387347 1559 ntBASIC5.93□□□□□ -1.46
BRCC3P46736 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
BRCC3P46736 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.93□□□□□ -1.46
BRCC3P46736 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 AL592429.1-201ENST00000403909 1473 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC104964.3-201ENST00000606115 2860 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 RNA5SP335-201ENST00000363817 110 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 AL390774.1-201ENST00000411924 246 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 RPSAP35-201ENST00000413753 818 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 TMEM183AP1-205ENST00000432739 290 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC092106.1-201ENST00000444291 373 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AL596266.1-201ENST00000448132 400 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
BRCC3P46736 RN7SL30P-201ENST00000488416 306 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.92□□□□□ -1.46
BRCC3P46736 OR5D2P-201ENST00000524390 911 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC126177.5-201ENST00000549599 178 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 BLZF2P-201ENST00000553776 1130 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 HNRNPCP1-201ENST00000556181 766 ntBASIC5.92□□□□□ -1.46
BRCC3P46736 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms