Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORA77-201ENST00000408716 125 ntBASIC5.78□□□□□ -1.48
HTTP42858 CASKP1-201ENST00000412870 582 ntBASIC5.78□□□□□ -1.48
HTTP42858 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 RIMKLBP2-201ENST00000424737 654 ntBASIC5.78□□□□□ -1.48
HTTP42858 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.78□□□□□ -1.48
HTTP42858 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC5.78□□□□□ -1.48
HTTP42858 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC5.78□□□□□ -1.48
HTTP42858 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HTTP42858 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
HTTP42858 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.77□□□□□ -1.49
HTTP42858 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.77□□□□□ -1.49
HTTP42858 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 OR52J1P-201ENST00000450596 932 ntBASIC5.77□□□□□ -1.49
HTTP42858 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.77□□□□□ -1.49
HTTP42858 AC023575.1-201ENST00000580510 358 ntBASIC5.77□□□□□ -1.49
HTTP42858 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.77□□□□□ -1.49
HTTP42858 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 ST13P16-201ENST00000401760 781 ntBASIC5.77□□□□□ -1.49
HTTP42858 AL732292.1-201ENST00000426692 226 ntBASIC5.77□□□□□ -1.49
HTTP42858 OR2B7P-201ENST00000429302 934 ntBASIC5.77□□□□□ -1.49
HTTP42858 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.77□□□□□ -1.49
HTTP42858 AC073143.1-201ENST00000436316 395 ntBASIC5.77□□□□□ -1.49
HTTP42858 AC079080.1-201ENST00000479841 822 ntBASIC5.77□□□□□ -1.49
HTTP42858 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.77□□□□□ -1.49
HTTP42858 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 CASC19-260ENST00000641828 2001 ntBASIC5.77□□□□□ -1.49
HTTP42858 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC5.77□□□□□ -1.49
HTTP42858 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.77□□□□□ -1.49
HTTP42858 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HTTP42858 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 KRT8P51-201ENST00000438938 274 ntBASIC5.77□□□□□ -1.49
HTTP42858 AC079922.1-201ENST00000443291 359 ntBASIC5.77□□□□□ -1.49
HTTP42858 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 SCARNA22-201ENST00000503991 125 ntBASIC5.77□□□□□ -1.49
HTTP42858 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.77□□□□□ -1.49
HTTP42858 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.77□□□□□ -1.49
HTTP42858 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HTTP42858 AC021106.3-201ENST00000623925 531 ntBASIC5.77□□□□□ -1.49
HTTP42858 AC067931.1-201ENST00000624190 671 ntBASIC5.77□□□□□ -1.49
HTTP42858 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 AP000350.7-201ENST00000624923 8030 ntBASIC5.76□□□□□ -1.49
HTTP42858 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.76□□□□□ -1.49
HTTP42858 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC5.76□□□□□ -1.49
HTTP42858 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.76□□□□□ -1.49
HTTP42858 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC5.76□□□□□ -1.49
HTTP42858 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HTTP42858 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 OR10T1P-201ENST00000424327 947 ntBASIC5.76□□□□□ -1.49
HTTP42858 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.76□□□□□ -1.49
HTTP42858 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.76□□□□□ -1.49
HTTP42858 AL354714.3-201ENST00000447284 493 ntBASIC5.76□□□□□ -1.49
HTTP42858 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.76□□□□□ -1.49
HTTP42858 CR383656.1-201ENST00000484916 377 ntBASIC5.76□□□□□ -1.49
HTTP42858 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.76□□□□□ -1.49
HTTP42858 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.76□□□□□ -1.49
HTTP42858 AC074101.1-201ENST00000637861 241 ntBASIC5.76□□□□□ -1.49
HTTP42858 AC100757.1-201ENST00000616872 1835 ntBASIC5.76□□□□□ -1.49
HTTP42858 ZNF840P-201ENST00000504759 1996 ntBASIC5.76□□□□□ -1.49
HTTP42858 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HTTP42858 AL122126.1-201ENST00000546905 1318 ntBASIC5.76□□□□□ -1.49
HTTP42858 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms