Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AP003400.5-201ENST00000624827 617 ntBASIC8.1□□□□□ -1.11
RXRBP28702 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 AC110792.3-201ENST00000595906 1614 ntBASIC8.1□□□□□ -1.11
RXRBP28702 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RXRBP28702 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RXRBP28702 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 AL034417.4-202ENST00000642135 2236 ntBASIC8.09□□□□□ -1.11
RXRBP28702 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RXRBP28702 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RXRBP28702 Y_RNA.169-201ENST00000363745 96 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RXRBP28702 ZNF602P-201ENST00000405929 924 ntBASIC8.09□□□□□ -1.11
RXRBP28702 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC8.09□□□□□ -1.11
RXRBP28702 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.09□□□□□ -1.11
RXRBP28702 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.09□□□□□ -1.11
RXRBP28702 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 MTND2P4-201ENST00000445034 1004 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AL031313.1-201ENST00000448435 256 ntBASIC8.09□□□□□ -1.11
RXRBP28702 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.09□□□□□ -1.11
RXRBP28702 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.09□□□□□ -1.11
RXRBP28702 RPS23P6-201ENST00000466136 431 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC8.09□□□□□ -1.11
RXRBP28702 AC099521.1-201ENST00000482557 334 ntBASIC8.09□□□□□ -1.11
RXRBP28702 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.09□□□□□ -1.11
RXRBP28702 MTCYBP16-201ENST00000509187 1129 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.09□□□□□ -1.11
RXRBP28702 AC093755.1-201ENST00000512950 1023 ntBASIC8.09□□□□□ -1.11
RXRBP28702 HMGN2P36-201ENST00000529541 409 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AC016144.1-201ENST00000548175 1087 ntBASIC8.09□□□□□ -1.11
RXRBP28702 ZNF321P-202ENST00000550843 495 ntBASIC8.09□□□□□ -1.11
RXRBP28702 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.09□□□□□ -1.11
RXRBP28702 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.09□□□□□ -1.11
RXRBP28702 AC090888.1-201ENST00000561335 1141 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AC093283.1-201ENST00000565306 1075 ntBASIC8.09□□□□□ -1.11
RXRBP28702 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 AL354718.1-201ENST00000619764 589 ntBASIC8.09□□□□□ -1.11
RXRBP28702 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RXRBP28702 MIR8080-201ENST00000622224 89 ntBASIC8.09□□□□□ -1.11
RXRBP28702 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 BX649567.1-201ENST00000642071 1134 ntBASIC8.09□□□□□ -1.11
RXRBP28702 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RXRBP28702 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.09□□□□□ -1.11
RXRBP28702 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.09□□□□□ -1.11
RXRBP28702 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RXRBP28702 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC8.09□□□□□ -1.12
RXRBP28702 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.09□□□□□ -1.12
RXRBP28702 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 AC132219.2-201ENST00000624416 2327 ntBASIC8.08□□□□□ -1.12
RXRBP28702 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 RNU6-623P-201ENST00000363143 105 ntBASIC8.08□□□□□ -1.12
RXRBP28702 RNU6-670P-201ENST00000364312 104 ntBASIC8.08□□□□□ -1.12
RXRBP28702 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 NME1P1-201ENST00000420914 382 ntBASIC8.08□□□□□ -1.12
RXRBP28702 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC8.08□□□□□ -1.12
RXRBP28702 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.08□□□□□ -1.12
RXRBP28702 BMI1P1-201ENST00000445879 941 ntBASIC8.08□□□□□ -1.12
RXRBP28702 AC007537.2-201ENST00000472093 511 ntBASIC8.08□□□□□ -1.12
RXRBP28702 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.08□□□□□ -1.12
RXRBP28702 RN7SL222P-201ENST00000476452 299 ntBASIC8.08□□□□□ -1.12
RXRBP28702 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RXRBP28702 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RXRBP28702 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.08□□□□□ -1.12
RXRBP28702 RNU6-615P-201ENST00000516065 106 ntBASIC8.08□□□□□ -1.12
RXRBP28702 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC8.08□□□□□ -1.12
RXRBP28702 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8.08□□□□□ -1.12
RXRBP28702 AC018552.1-201ENST00000562099 811 ntBASIC8.08□□□□□ -1.12
RXRBP28702 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.08□□□□□ -1.12
RXRBP28702 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.08□□□□□ -1.12
RXRBP28702 MIR4480-201ENST00000582492 71 ntBASIC8.08□□□□□ -1.12
RXRBP28702 SUGT1P3-202ENST00000604259 383 ntBASIC8.08□□□□□ -1.12
RXRBP28702 AC021851.1-201ENST00000608537 1082 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms